Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3142
Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Fusidic 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,961,566 | - | -0.8 | |||
3,961,693 | + | +0.0 | |||
3,961,779 | - | DvMF_3141 | 0.23 | -0.4 | |
3,961,789 | - | DvMF_3141 | 0.25 | +0.4 | |
3,962,067 | + | DvMF_3141 | 0.74 | +0.1 | |
3,962,467 | - | +0.5 | |||
3,962,471 | + | -0.4 | |||
3,962,486 | - | -0.4 | |||
3,962,598 | + | DvMF_3142 | 0.17 | -0.4 | |
3,962,820 | + | DvMF_3142 | 0.34 | +0.6 | |
3,962,933 | + | DvMF_3142 | 0.43 | -0.1 | |
3,963,272 | - | DvMF_3142 | 0.69 | +0.6 | |
3,963,331 | - | DvMF_3142 | 0.74 | -0.1 | |
3,963,417 | - | DvMF_3142 | 0.80 | -2.0 | |
3,963,438 | + | DvMF_3142 | 0.82 | -0.1 | |
3,963,711 | - | +0.1 | |||
3,963,718 | - | -0.8 | |||
3,963,741 | - | -1.4 | |||
3,963,822 | + | -0.2 | |||
3,963,943 | - | DvMF_3143 | 0.12 | +0.1 | |
3,964,126 | + | DvMF_3143 | 0.22 | -0.7 | |
3,964,276 | - | DvMF_3143 | 0.30 | -0.6 | |
3,964,283 | + | DvMF_3143 | 0.31 | -0.8 | |
3,964,522 | - | DvMF_3143 | 0.44 | +0.0 | |
3,964,653 | + | DvMF_3143 | 0.51 | -2.1 | |
3,964,661 | - | DvMF_3143 | 0.52 | -1.4 |
Or see this region's nucleotide sequence