Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2776 and DvMF_2777 are separated by 7 nucleotides DvMF_2777 and DvMF_2778 are separated by 3 nucleotides DvMF_2778 and DvMF_2779 overlap by 4 nucleotides
DvMF_2776: DvMF_2776 - hypothetical protein (RefSeq), at 3,511,405 to 3,511,956
_2776
DvMF_2777: DvMF_2777 - hypothetical protein (RefSeq), at 3,511,964 to 3,512,887
_2777
DvMF_2778: DvMF_2778 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,512,891 to 3,515,362
_2778
DvMF_2779: DvMF_2779 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 3,515,359 to 3,517,572
_2779
Position (kb)
3512
3513
3514
3515
3516 Strain fitness (log2 ratio)
-1
0
1 at 3512.071 kb on + strand, within DvMF_2777 at 3512.090 kb on + strand, within DvMF_2777 at 3512.166 kb on - strand, within DvMF_2777 at 3512.281 kb on - strand, within DvMF_2777 at 3512.326 kb on + strand, within DvMF_2777 at 3512.326 kb on + strand, within DvMF_2777 at 3512.524 kb on + strand, within DvMF_2777 at 3512.711 kb on - strand, within DvMF_2777 at 3512.782 kb on + strand, within DvMF_2777 at 3512.924 kb on + strand at 3513.116 kb on - strand at 3513.356 kb on - strand, within DvMF_2778 at 3513.381 kb on + strand, within DvMF_2778 at 3513.491 kb on - strand, within DvMF_2778 at 3513.735 kb on + strand, within DvMF_2778 at 3513.863 kb on + strand, within DvMF_2778 at 3514.244 kb on - strand, within DvMF_2778 at 3514.551 kb on + strand, within DvMF_2778 at 3514.668 kb on - strand, within DvMF_2778 at 3514.686 kb on + strand, within DvMF_2778 at 3514.936 kb on - strand, within DvMF_2778 at 3515.004 kb on - strand, within DvMF_2778 at 3515.493 kb on + strand at 3515.646 kb on - strand, within DvMF_2779 at 3515.698 kb on - strand, within DvMF_2779 at 3515.778 kb on + strand, within DvMF_2779 at 3515.778 kb on + strand, within DvMF_2779 at 3515.813 kb on + strand, within DvMF_2779 at 3515.849 kb on + strand, within DvMF_2779 at 3516.187 kb on - strand, within DvMF_2779 at 3516.218 kb on - strand, within DvMF_2779 at 3516.323 kb on - strand, within DvMF_2779
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Fusidic 0.03125 mg/ml remove 3,512,071 + DvMF_2777 0.12 -0.5 3,512,090 + DvMF_2777 0.14 -0.0 3,512,166 - DvMF_2777 0.22 +0.5 3,512,281 - DvMF_2777 0.34 -0.2 3,512,326 + DvMF_2777 0.39 +0.3 3,512,326 + DvMF_2777 0.39 -0.1 3,512,524 + DvMF_2777 0.61 -0.3 3,512,711 - DvMF_2777 0.81 -1.6 3,512,782 + DvMF_2777 0.89 -0.0 3,512,924 + -0.6 3,513,116 - -0.1 3,513,356 - DvMF_2778 0.19 +0.7 3,513,381 + DvMF_2778 0.20 -0.4 3,513,491 - DvMF_2778 0.24 -0.9 3,513,735 + DvMF_2778 0.34 -0.4 3,513,863 + DvMF_2778 0.39 -0.8 3,514,244 - DvMF_2778 0.55 -0.6 3,514,551 + DvMF_2778 0.67 -0.1 3,514,668 - DvMF_2778 0.72 +0.7 3,514,686 + DvMF_2778 0.73 -0.5 3,514,936 - DvMF_2778 0.83 -0.7 3,515,004 - DvMF_2778 0.85 +0.9 3,515,493 + -0.3 3,515,646 - DvMF_2779 0.13 -0.0 3,515,698 - DvMF_2779 0.15 -0.1 3,515,778 + DvMF_2779 0.19 -0.5 3,515,778 + DvMF_2779 0.19 -0.0 3,515,813 + DvMF_2779 0.21 -1.2 3,515,849 + DvMF_2779 0.22 -1.0 3,516,187 - DvMF_2779 0.37 -0.5 3,516,218 - DvMF_2779 0.39 -0.3 3,516,323 - DvMF_2779 0.44 -0.0
Or see this region's nucleotide sequence