Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2752
Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Fusidic 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,476,513 | + | -0.7 | |||
3,476,529 | + | -0.8 | |||
3,476,554 | - | +0.7 | |||
3,476,591 | + | +0.1 | |||
3,476,673 | + | -0.2 | |||
3,476,673 | + | -0.5 | |||
3,476,681 | - | -1.2 | |||
3,476,681 | - | -0.6 | |||
3,476,685 | + | -1.1 | |||
3,476,693 | - | -1.0 | |||
3,476,823 | + | DvMF_2751 | 0.24 | -1.0 | |
3,476,987 | - | DvMF_2751 | 0.42 | -0.0 | |
3,477,011 | + | DvMF_2751 | 0.45 | +0.1 | |
3,477,101 | + | DvMF_2751 | 0.55 | -0.2 | |
3,477,128 | + | DvMF_2751 | 0.58 | -0.8 | |
3,477,226 | - | DvMF_2751 | 0.69 | -0.4 | |
3,477,250 | - | DvMF_2751 | 0.71 | +0.7 | |
3,477,250 | - | DvMF_2751 | 0.71 | +0.3 | |
3,477,350 | + | DvMF_2751 | 0.82 | -1.2 | |
3,477,719 | + | DvMF_2752 | 0.21 | -0.4 | |
3,477,997 | - | DvMF_2752 | 0.49 | -0.2 | |
3,478,002 | - | DvMF_2752 | 0.50 | -1.7 | |
3,478,009 | + | DvMF_2752 | 0.51 | -1.3 | |
3,478,132 | - | DvMF_2752 | 0.63 | -0.5 | |
3,478,236 | - | DvMF_2752 | 0.73 | -0.4 | |
3,478,272 | - | DvMF_2752 | 0.77 | -0.5 | |
3,478,351 | + | DvMF_2752 | 0.85 | -0.6 | |
3,478,351 | + | DvMF_2752 | 0.85 | -0.9 | |
3,478,856 | - | DvMF_2753 | 0.47 | +0.0 | |
3,478,921 | - | DvMF_2753 | 0.55 | +2.9 | |
3,479,065 | + | DvMF_2753 | 0.74 | -0.6 | |
3,479,227 | + | -0.3 | |||
3,479,313 | - | -0.2 |
Or see this region's nucleotide sequence