Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2712 and DvMF_2713 are separated by 171 nucleotides DvMF_2713 and DvMF_2714 are separated by 15 nucleotides
DvMF_2712: DvMF_2712 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,432,551 to 3,434,572
_2712
DvMF_2713: DvMF_2713 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,434,744 to 3,436,714
_2713
DvMF_2714: DvMF_2714 - protein of unknown function DUF362 (RefSeq), at 3,436,730 to 3,437,710
_2714
Position (kb)
3434
3435
3436
3437 Strain fitness (log2 ratio)
-2
-1
0
1 at 3433.954 kb on - strand, within DvMF_2712 at 3434.228 kb on + strand, within DvMF_2712 at 3434.345 kb on - strand, within DvMF_2712 at 3434.364 kb on + strand, within DvMF_2712 at 3434.453 kb on - strand at 3434.581 kb on + strand at 3435.007 kb on - strand, within DvMF_2713 at 3435.040 kb on - strand, within DvMF_2713 at 3435.126 kb on + strand, within DvMF_2713 at 3435.707 kb on - strand, within DvMF_2713 at 3435.845 kb on - strand, within DvMF_2713 at 3435.870 kb on + strand, within DvMF_2713 at 3435.880 kb on + strand, within DvMF_2713 at 3435.951 kb on + strand, within DvMF_2713 at 3436.136 kb on + strand, within DvMF_2713 at 3436.238 kb on - strand, within DvMF_2713 at 3436.318 kb on - strand, within DvMF_2713 at 3436.347 kb on - strand, within DvMF_2713 at 3436.421 kb on + strand, within DvMF_2713 at 3436.421 kb on + strand, within DvMF_2713 at 3436.451 kb on + strand, within DvMF_2713 at 3436.565 kb on + strand at 3436.639 kb on - strand at 3436.773 kb on - strand at 3436.907 kb on + strand, within DvMF_2714 at 3437.234 kb on - strand, within DvMF_2714 at 3437.323 kb on - strand, within DvMF_2714 at 3437.463 kb on + strand, within DvMF_2714 at 3437.495 kb on + strand, within DvMF_2714 at 3437.528 kb on - strand, within DvMF_2714 at 3437.544 kb on - strand, within DvMF_2714 at 3437.544 kb on - strand, within DvMF_2714
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Fusidic 0.03125 mg/ml remove 3,433,954 - DvMF_2712 0.69 -0.5 3,434,228 + DvMF_2712 0.83 -0.7 3,434,345 - DvMF_2712 0.89 -1.4 3,434,364 + DvMF_2712 0.90 -2.0 3,434,453 - -0.9 3,434,581 + +0.1 3,435,007 - DvMF_2713 0.13 -0.5 3,435,040 - DvMF_2713 0.15 -1.4 3,435,126 + DvMF_2713 0.19 -1.0 3,435,707 - DvMF_2713 0.49 +0.7 3,435,845 - DvMF_2713 0.56 -1.4 3,435,870 + DvMF_2713 0.57 -0.5 3,435,880 + DvMF_2713 0.58 -1.3 3,435,951 + DvMF_2713 0.61 +0.1 3,436,136 + DvMF_2713 0.71 +0.6 3,436,238 - DvMF_2713 0.76 -0.7 3,436,318 - DvMF_2713 0.80 -1.2 3,436,347 - DvMF_2713 0.81 +0.6 3,436,421 + DvMF_2713 0.85 -0.7 3,436,421 + DvMF_2713 0.85 -0.7 3,436,451 + DvMF_2713 0.87 -0.8 3,436,565 + -0.8 3,436,639 - -1.2 3,436,773 - -0.1 3,436,907 + DvMF_2714 0.18 -0.5 3,437,234 - DvMF_2714 0.51 -0.8 3,437,323 - DvMF_2714 0.60 -0.3 3,437,463 + DvMF_2714 0.75 -0.4 3,437,495 + DvMF_2714 0.78 -0.7 3,437,528 - DvMF_2714 0.81 -1.0 3,437,544 - DvMF_2714 0.83 -1.7 3,437,544 - DvMF_2714 0.83 -1.0
Or see this region's nucleotide sequence