Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1851
Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Fusidic 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,262,555 | + | DvMF_1850 | 0.37 | +0.0 | |
2,262,661 | - | DvMF_1850 | 0.44 | +0.2 | |
2,262,949 | - | DvMF_1850 | 0.63 | -0.5 | |
2,263,092 | + | DvMF_1850 | 0.72 | -0.0 | |
2,263,100 | - | DvMF_1850 | 0.73 | -0.1 | |
2,263,331 | + | DvMF_1850 | 0.88 | -0.1 | |
2,263,339 | - | DvMF_1850 | 0.89 | -0.4 | |
2,263,381 | + | -0.4 | |||
2,263,381 | + | +0.4 | |||
2,263,440 | + | -0.8 | |||
2,263,448 | - | -0.6 | |||
2,263,461 | + | -0.9 | |||
2,263,461 | - | -1.0 | |||
2,263,843 | + | DvMF_1851 | 0.47 | +0.2 | |
2,263,921 | + | DvMF_1851 | 0.58 | -2.9 | |
2,264,091 | + | DvMF_1851 | 0.82 | +0.2 | |
2,264,158 | + | -1.1 | |||
2,264,163 | + | -0.4 | |||
2,264,428 | + | -0.0 | |||
2,264,448 | + | -0.0 | |||
2,264,477 | - | +0.5 | |||
2,264,511 | - | -1.0 | |||
2,264,570 | + | -0.2 | |||
2,264,743 | + | DvMF_1852 | 0.10 | -0.0 | |
2,264,743 | + | DvMF_1852 | 0.10 | -0.5 | |
2,264,743 | + | DvMF_1852 | 0.10 | -0.3 | |
2,264,826 | - | DvMF_1852 | 0.13 | -0.8 | |
2,264,994 | - | DvMF_1852 | 0.20 | -0.5 | |
2,265,123 | - | DvMF_1852 | 0.25 | -0.7 |
Or see this region's nucleotide sequence