Experiment: MoYLS4 with Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0284 and DvMF_0285 are separated by 347 nucleotides DvMF_0285 and DvMF_0286 are separated by 110 nucleotides
DvMF_0284: DvMF_0284 - CheW protein (RefSeq), at 324,684 to 325,160
_0284
DvMF_0285: DvMF_0285 - transcription-repair coupling factor (RefSeq), at 325,508 to 329,101
_0285
DvMF_0286: DvMF_0286 - hypothetical protein (RefSeq), at 329,212 to 330,459
_0286
Position (kb) 325
326
327
328
329
330 Strain fitness (log2 ratio) -2
-1
0
1
2 at 324.563 kb on - strand at 325.234 kb on + strand at 325.266 kb on + strand at 325.278 kb on + strand at 325.337 kb on - strand at 325.584 kb on + strand at 325.705 kb on + strand at 326.065 kb on - strand, within DvMF_0285 at 326.210 kb on - strand, within DvMF_0285 at 326.234 kb on - strand, within DvMF_0285 at 326.516 kb on + strand, within DvMF_0285 at 326.565 kb on + strand, within DvMF_0285 at 326.758 kb on + strand, within DvMF_0285 at 326.809 kb on - strand, within DvMF_0285 at 326.945 kb on + strand, within DvMF_0285 at 327.035 kb on - strand, within DvMF_0285 at 327.217 kb on + strand, within DvMF_0285 at 327.235 kb on - strand, within DvMF_0285 at 327.394 kb on - strand, within DvMF_0285 at 327.418 kb on - strand, within DvMF_0285 at 327.442 kb on - strand, within DvMF_0285 at 327.544 kb on - strand, within DvMF_0285 at 327.709 kb on + strand, within DvMF_0285 at 327.874 kb on - strand, within DvMF_0285 at 327.909 kb on + strand, within DvMF_0285 at 327.985 kb on - strand, within DvMF_0285 at 327.994 kb on + strand, within DvMF_0285 at 328.060 kb on - strand, within DvMF_0285 at 328.075 kb on - strand, within DvMF_0285 at 328.269 kb on - strand, within DvMF_0285 at 328.286 kb on + strand, within DvMF_0285 at 328.351 kb on + strand, within DvMF_0285 at 328.378 kb on - strand, within DvMF_0285 at 328.397 kb on - strand, within DvMF_0285 at 328.450 kb on + strand, within DvMF_0285 at 328.524 kb on + strand, within DvMF_0285 at 328.548 kb on + strand, within DvMF_0285 at 328.587 kb on - strand, within DvMF_0285 at 329.101 kb on + strand at 329.104 kb on - strand at 329.165 kb on - strand at 329.366 kb on - strand, within DvMF_0286 at 329.368 kb on - strand, within DvMF_0286 at 329.394 kb on - strand, within DvMF_0286 at 329.400 kb on - strand, within DvMF_0286 at 329.697 kb on + strand, within DvMF_0286 at 329.715 kb on + strand, within DvMF_0286 at 329.767 kb on + strand, within DvMF_0286
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Fusidic 0.03125 mg/ml remove 324,563 - +0.5 325,234 + -0.3 325,266 + -0.2 325,278 + -0.6 325,337 - -0.9 325,584 + -0.4 325,705 + -0.3 326,065 - DvMF_0285 0.15 +0.2 326,210 - DvMF_0285 0.20 -0.3 326,234 - DvMF_0285 0.20 -0.8 326,516 + DvMF_0285 0.28 -0.3 326,565 + DvMF_0285 0.29 +2.4 326,758 + DvMF_0285 0.35 -0.5 326,809 - DvMF_0285 0.36 +0.0 326,945 + DvMF_0285 0.40 -0.2 327,035 - DvMF_0285 0.42 -1.2 327,217 + DvMF_0285 0.48 -0.4 327,235 - DvMF_0285 0.48 -0.1 327,394 - DvMF_0285 0.52 -1.4 327,418 - DvMF_0285 0.53 -0.3 327,442 - DvMF_0285 0.54 +0.1 327,544 - DvMF_0285 0.57 -0.3 327,709 + DvMF_0285 0.61 -0.8 327,874 - DvMF_0285 0.66 -0.5 327,909 + DvMF_0285 0.67 -0.4 327,985 - DvMF_0285 0.69 +0.2 327,994 + DvMF_0285 0.69 -0.2 328,060 - DvMF_0285 0.71 -1.5 328,075 - DvMF_0285 0.71 +0.3 328,269 - DvMF_0285 0.77 -1.8 328,286 + DvMF_0285 0.77 -0.8 328,351 + DvMF_0285 0.79 -0.3 328,378 - DvMF_0285 0.80 -0.3 328,397 - DvMF_0285 0.80 +0.8 328,450 + DvMF_0285 0.82 -0.6 328,524 + DvMF_0285 0.84 -0.2 328,548 + DvMF_0285 0.85 -1.0 328,587 - DvMF_0285 0.86 -1.2 329,101 + -1.1 329,104 - -0.6 329,165 - -0.7 329,366 - DvMF_0286 0.12 -1.0 329,368 - DvMF_0286 0.12 -1.3 329,394 - DvMF_0286 0.15 -0.9 329,400 - DvMF_0286 0.15 -0.6 329,697 + DvMF_0286 0.39 -0.7 329,715 + DvMF_0286 0.40 -0.1 329,767 + DvMF_0286 0.44 -1.4
Or see this region's nucleotide sequence