Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3652

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,388,646	+		Shewana3_3650	0.88	+0.2
4,388,652	-		Shewana3_3650	0.90	-0.1
4,388,677	+				-2.1
4,388,941	-		Shewana3_3651	0.29	-0.1
4,389,017	-		Shewana3_3651	0.38	-1.1
4,389,038	+		Shewana3_3651	0.41	-1.7
4,389,047	-		Shewana3_3651	0.42	-0.8
4,389,091	+		Shewana3_3651	0.47	-1.6
4,389,099	-		Shewana3_3651	0.48	+0.4
4,389,099	-		Shewana3_3651	0.48	-0.7
4,389,123	+		Shewana3_3651	0.50	-1.1
4,389,180	-		Shewana3_3651	0.57	-1.4
4,389,218	-		Shewana3_3651	0.61	-1.3
4,389,304	+		Shewana3_3651	0.71	-0.4
4,389,315	-		Shewana3_3651	0.73	-2.2
4,389,322	+		Shewana3_3651	0.73	-1.2
4,389,322	+		Shewana3_3651	0.73	-2.4
4,389,322	+		Shewana3_3651	0.73	-0.2
4,389,330	-		Shewana3_3651	0.74	-0.0
4,389,330	-		Shewana3_3651	0.74	-0.4
4,389,332	-		Shewana3_3651	0.75	+0.4
4,389,344	+		Shewana3_3651	0.76	-1.2
4,389,344	+		Shewana3_3651	0.76	-0.3
4,389,344	+		Shewana3_3651	0.76	-2.3
4,389,490	+				-0.3
4,389,490	+				-0.7
4,389,563	+				+0.9
4,389,571	+				-2.4
4,389,615	-		Shewana3_3652	0.11	+0.3
4,389,724	+		Shewana3_3652	0.30	-2.7
4,389,778	+		Shewana3_3652	0.39	-0.3
4,389,781	-		Shewana3_3652	0.40	-0.7
4,389,802	+		Shewana3_3652	0.44	-0.5
4,389,817	+		Shewana3_3652	0.46	+0.1
4,389,936	+		Shewana3_3652	0.67	-1.1
4,389,961	-		Shewana3_3652	0.71	-0.7
4,390,041	-		Shewana3_3652	0.85	-0.1
4,390,041	-		Shewana3_3652	0.85	-0.7
4,390,260	+		Shewana3_3653	0.29	-0.6
4,390,268	-		Shewana3_3653	0.31	-0.6
4,390,411	+		Shewana3_3653	0.60	-0.8
4,390,469	+		Shewana3_3653	0.72	-1.0
4,390,469	+		Shewana3_3653	0.72	-1.0
4,390,469	+		Shewana3_3653	0.72	-0.9
4,390,477	-		Shewana3_3653	0.74	-1.5
4,390,477	-		Shewana3_3653	0.74	-1.3
4,390,477	-		Shewana3_3653	0.74	-1.2
4,390,493	+		Shewana3_3653	0.77	-0.3
4,390,512	+		Shewana3_3653	0.81	-0.6
4,390,538	+		Shewana3_3653	0.86	-0.6
4,390,546	-		Shewana3_3653	0.88	-1.6
4,390,580	-				-2.6
4,390,636	-				-1.4
4,390,650	-				+0.4
4,390,758	-				-1.6
4,390,768	+				-0.1
4,390,977	-				+1.4
4,391,103	-		Shewana3_3654	0.13	+0.7