Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3402

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,069,844	+				-1.3
4,069,868	-				-0.2
4,070,093	+				-2.6
4,070,141	+		Shewana3_3401	0.19	-0.8
4,070,143	-		Shewana3_3401	0.19	-0.5
4,070,339	+		Shewana3_3401	0.57	-0.0
4,070,383	-		Shewana3_3401	0.66	-0.5
4,070,723	+				+1.1
4,070,793	+				+0.4
4,070,834	-				+0.9
4,070,970	+		Shewana3_3402	0.16	-0.2
4,071,060	-		Shewana3_3402	0.23	+1.0
4,071,076	+		Shewana3_3402	0.24	-1.2
4,071,146	-		Shewana3_3402	0.29	+1.2
4,071,146	-		Shewana3_3402	0.29	+1.1
4,071,167	-		Shewana3_3402	0.31	+0.3
4,071,216	+		Shewana3_3402	0.35	-1.7
4,071,223	+		Shewana3_3402	0.35	+0.5
4,071,281	+		Shewana3_3402	0.40	-1.7
4,071,289	-		Shewana3_3402	0.40	+0.7
4,071,355	-		Shewana3_3402	0.45	+0.4
4,071,434	+		Shewana3_3402	0.51	-0.2
4,071,523	-		Shewana3_3402	0.58	+0.3
4,071,563	-		Shewana3_3402	0.61	+1.1
4,071,767	-		Shewana3_3402	0.77	+0.4
4,072,022	+				-0.9
4,072,030	-				+0.0
4,072,040	-				+0.4
4,072,054	-				+0.4
4,072,099	-				+1.3
4,072,136	+				-4.5
4,072,148	+				-2.9
4,072,187	+				-1.1
4,072,222	+				-2.0
4,072,263	-				+0.2
4,072,285	-				+0.2
4,072,285	-				+0.0
4,072,298	+				-1.9
4,072,391	+		Shewana3_3403	0.14	-0.5
4,072,411	-		Shewana3_3403	0.17	+0.2
4,072,564	-		Shewana3_3403	0.38	-0.3
4,072,607	-		Shewana3_3403	0.45	-1.8
4,072,706	-		Shewana3_3403	0.59	-0.7
4,072,720	+		Shewana3_3403	0.61	+0.1
4,072,739	-		Shewana3_3403	0.63	-0.4
4,072,798	+		Shewana3_3403	0.72	-0.9
4,072,798	+		Shewana3_3403	0.72	-1.1
4,072,805	+		Shewana3_3403	0.73	+0.1
4,072,806	-		Shewana3_3403	0.73	-2.8
4,072,850	-		Shewana3_3403	0.79	-0.5
4,072,976	+				-0.1
4,073,042	-				+0.3