Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2827
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 3,374,755 | - | Shewana3_2826 | 0.14 | -1.0 | |
| 3,374,765 | - | Shewana3_2826 | 0.15 | +0.8 | |
| 3,374,842 | + | Shewana3_2826 | 0.23 | -0.0 | |
| 3,374,891 | + | Shewana3_2826 | 0.27 | +0.1 | |
| 3,375,007 | - | Shewana3_2826 | 0.39 | +0.6 | |
| 3,375,098 | + | Shewana3_2826 | 0.48 | -0.6 | |
| 3,375,117 | + | Shewana3_2826 | 0.50 | -0.1 | |
| 3,375,201 | + | Shewana3_2826 | 0.58 | +0.6 | |
| 3,375,388 | + | Shewana3_2826 | 0.76 | +0.6 | |
| 3,375,398 | + | Shewana3_2826 | 0.77 | -0.9 | |
| 3,375,411 | + | Shewana3_2826 | 0.79 | +0.5 | |
| 3,375,433 | + | Shewana3_2826 | 0.81 | -1.4 | |
| 3,375,433 | + | Shewana3_2826 | 0.81 | -0.2 | |
| 3,375,434 | - | Shewana3_2826 | 0.81 | -1.4 | |
| 3,375,458 | + | Shewana3_2826 | 0.83 | -0.3 | |
| 3,375,605 | + | +0.5 | |||
| 3,375,698 | + | Shewana3_2827 | 0.19 | +1.4 | |
| 3,376,079 | + | +0.3 | |||
| 3,376,087 | - | -0.5 | |||
| 3,376,164 | + | +0.5 | |||
| 3,376,170 | - | +0.5 | |||
| 3,376,385 | - | +1.7 | |||
| 3,376,414 | + | +2.5 | |||
| 3,376,422 | - | +0.5 | |||
| 3,376,466 | + | +0.2 | |||
| 3,376,717 | + | -0.2 | |||
| 3,376,802 | + | -1.0 |
Or see this region's nucleotide sequence