Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2746
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,276,219 | - | Shewana3_2745 | 0.49 | +0.2 | |
3,276,374 | + | Shewana3_2745 | 0.59 | +0.7 | |
3,276,382 | - | Shewana3_2745 | 0.60 | -1.3 | |
3,276,629 | + | Shewana3_2745 | 0.75 | +0.4 | |
3,276,999 | - | -2.0 | |||
3,276,999 | - | -0.4 | |||
3,277,108 | + | -0.8 | |||
3,277,138 | + | -2.1 | |||
3,277,138 | + | -0.3 | |||
3,277,376 | + | Shewana3_2746 | 0.35 | -1.4 | |
3,277,376 | + | Shewana3_2746 | 0.35 | +1.0 | |
3,277,405 | - | Shewana3_2746 | 0.39 | +0.6 | |
3,277,512 | - | Shewana3_2746 | 0.52 | -0.2 | |
3,277,621 | - | Shewana3_2746 | 0.65 | -0.2 | |
3,277,904 | - | +0.2 | |||
3,277,904 | - | -1.8 | |||
3,278,098 | - | +3.1 | |||
3,278,129 | - | +1.3 | |||
3,278,165 | + | +0.6 | |||
3,278,212 | + | -0.6 | |||
3,278,323 | - | Shewana3_2747 | 0.14 | -0.0 | |
3,278,382 | + | Shewana3_2747 | 0.18 | -0.8 | |
3,278,414 | - | Shewana3_2747 | 0.21 | +0.5 | |
3,278,492 | - | Shewana3_2747 | 0.27 | +0.6 | |
3,278,745 | + | Shewana3_2747 | 0.47 | -0.8 | |
3,278,886 | + | Shewana3_2747 | 0.58 | -0.3 |
Or see this region's nucleotide sequence