Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2550
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,048,487 | - | asnB | Shewana3_2549 | 0.53 | -0.3 |
3,049,015 | + | asnB | Shewana3_2549 | 0.84 | -0.8 |
3,049,210 | + | +0.6 | |||
3,049,461 | + | +0.7 | |||
3,049,521 | - | +0.4 | |||
3,049,637 | + | Shewana3_2550 | 0.21 | +1.1 | |
3,049,677 | - | Shewana3_2550 | 0.25 | -0.4 | |
3,049,980 | - | Shewana3_2550 | 0.55 | +1.9 | |
3,050,972 | + | Shewana3_2551 | 0.12 | +0.3 | |
3,050,987 | - | Shewana3_2551 | 0.13 | +0.5 | |
3,051,260 | + | Shewana3_2551 | 0.25 | -0.5 | |
3,051,268 | - | Shewana3_2551 | 0.25 | -2.9 |
Or see this region's nucleotide sequence