Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2263
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,723,732 | - | +0.5 | |||
2,723,739 | - | +0.5 | |||
2,723,757 | - | -0.7 | |||
2,723,873 | + | Shewana3_2262 | 0.21 | -1.3 | |
2,723,895 | - | Shewana3_2262 | 0.24 | +0.8 | |
2,723,938 | - | Shewana3_2262 | 0.30 | +0.0 | |
2,724,178 | - | Shewana3_2262 | 0.66 | -1.3 | |
2,724,198 | - | Shewana3_2262 | 0.69 | +2.8 | |
2,724,220 | + | Shewana3_2262 | 0.72 | -0.3 | |
2,724,584 | + | Shewana3_2263 | 0.25 | -1.8 | |
2,724,599 | - | Shewana3_2263 | 0.32 | +0.8 | |
2,724,622 | + | Shewana3_2263 | 0.42 | +0.7 | |
2,724,640 | + | Shewana3_2263 | 0.50 | +1.0 | |
2,724,973 | - | -0.1 | |||
2,724,973 | - | +0.2 | |||
2,725,220 | + | Shewana3_2264 | 0.22 | +1.2 | |
2,725,228 | - | Shewana3_2264 | 0.22 | +2.1 | |
2,725,337 | + | Shewana3_2264 | 0.28 | -0.5 | |
2,725,514 | + | Shewana3_2264 | 0.38 | -0.2 | |
2,725,514 | + | Shewana3_2264 | 0.38 | +0.5 | |
2,725,640 | + | Shewana3_2264 | 0.45 | +2.8 | |
2,725,727 | + | Shewana3_2264 | 0.50 | +1.2 |
Or see this region's nucleotide sequence