Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2207

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,648,229	+		Shewana3_2206	0.63	+1.3
2,648,280	-		Shewana3_2206	0.68	-0.3
2,648,284	+		Shewana3_2206	0.69	-0.0
2,648,318	+		Shewana3_2206	0.72	+0.0
2,648,318	+		Shewana3_2206	0.72	+2.8
2,648,479	+		Shewana3_2206	0.89	+1.3
2,648,487	-		Shewana3_2206	0.90	+0.1
2,648,534	+				-1.3
2,648,606	-				+1.3
2,649,081	-				+1.8
2,649,139	-				-0.1
2,649,185	-				-0.5
2,649,348	+				+0.8
2,649,454	+				-0.4
2,649,536	+		Shewana3_2207	0.11	+0.0
2,649,544	-		Shewana3_2207	0.12	-0.5
2,649,570	-		Shewana3_2207	0.12	-1.4
2,649,691	+		Shewana3_2207	0.17	+0.0
2,649,845	-		Shewana3_2207	0.22	-0.5
2,649,989	-		Shewana3_2207	0.27	-1.2
2,649,994	-		Shewana3_2207	0.27	-0.1
2,650,054	-		Shewana3_2207	0.30	-0.2
2,650,142	+		Shewana3_2207	0.33	-1.2
2,650,228	-		Shewana3_2207	0.36	+0.3
2,650,295	-		Shewana3_2207	0.38	+2.8
2,650,497	+		Shewana3_2207	0.45	-1.1
2,650,500	-		Shewana3_2207	0.45	+1.8
2,650,500	-		Shewana3_2207	0.45	+0.8
2,650,500	-		Shewana3_2207	0.45	+2.8
2,650,883	-		Shewana3_2207	0.59	+0.4
2,651,141	+		Shewana3_2207	0.68	+0.0
2,651,159	-		Shewana3_2207	0.69	+1.0
2,651,182	-		Shewana3_2207	0.69	+4.4
2,651,274	+		Shewana3_2207	0.73	-0.6
2,651,582	+		Shewana3_2207	0.83	+0.3
2,651,649	-		Shewana3_2207	0.86	+0.8
2,651,649	-		Shewana3_2207	0.86	+0.5
2,651,649	-		Shewana3_2207	0.86	-0.6
2,651,796	-				+0.8
2,651,935	+				-0.2
2,652,011	-				+1.3
2,652,116	+				+1.3
2,652,194	+				+1.3
2,652,352	-		Shewana3_2208	0.14	+2.8
2,652,376	+		Shewana3_2208	0.15	-0.5
2,652,391	-		Shewana3_2208	0.16	+1.0
2,652,529	+		Shewana3_2208	0.23	+1.8
2,652,694	-		Shewana3_2208	0.31	-0.3
2,652,828	-		Shewana3_2208	0.38	-0.2
2,652,876	-		Shewana3_2208	0.41	+0.8
2,652,876	-		Shewana3_2208	0.41	-0.7
2,652,940	-		Shewana3_2208	0.44	+1.8
2,653,012	-		Shewana3_2208	0.48	+0.0