Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1961
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,334,136 | + | Shewana3_1960 | 0.17 | +1.7 | |
2,334,183 | + | Shewana3_1960 | 0.21 | +1.6 | |
2,334,238 | + | Shewana3_1960 | 0.26 | +2.4 | |
2,334,277 | - | Shewana3_1960 | 0.29 | +2.8 | |
2,334,285 | - | Shewana3_1960 | 0.30 | +2.8 | |
2,334,357 | + | Shewana3_1960 | 0.36 | -0.7 | |
2,334,632 | + | Shewana3_1960 | 0.61 | +1.6 | |
2,334,952 | - | Shewana3_1960 | 0.89 | +0.7 | |
2,335,024 | + | +1.7 | |||
2,335,558 | + | Shewana3_1962 | 0.57 | +0.7 | |
2,335,845 | - | +2.1 | |||
2,335,938 | - | ansA | Shewana3_1963 | 0.19 | -0.9 |
2,336,041 | - | ansA | Shewana3_1963 | 0.29 | -1.2 |
2,336,150 | - | ansA | Shewana3_1963 | 0.40 | +0.1 |
2,336,215 | + | ansA | Shewana3_1963 | 0.46 | +1.8 |
Or see this region's nucleotide sequence