Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1463

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,696,409	-	fadJ	Shewana3_1461	0.88	-0.6
1,696,512	+				+0.0
1,696,518	+				-0.2
1,696,604	+				+0.8
1,696,612	-				-0.1
1,696,824	-				+0.3
1,696,835	-				+0.2
1,697,119	-				+0.1
1,697,120	+				-0.2
1,697,137	-				+2.4
1,697,222	+				+0.1
1,697,222	+				+1.4
1,697,230	-				-0.0
1,697,230	-				+0.8
1,697,230	-				+0.3
1,697,272	+				+2.4
1,697,280	-				+2.1
1,697,304	+				+0.2
1,697,311	-				+1.2
1,697,312	-				+1.0
1,697,312	-				+0.7
1,697,846	-		Shewana3_1463	0.74	+0.9
1,697,893	-		Shewana3_1463	0.82	+0.1
1,698,004	-				+0.4
1,698,143	+				-1.5
1,698,197	+				-2.1
1,698,238	-				+2.4
1,698,238	-				-1.1
1,698,249	+				-1.1
1,698,249	+				-1.7
1,698,249	+				+0.9
1,698,257	-				-0.6
1,698,278	+				+1.4
1,698,286	-				+1.0
1,698,405	-				+2.4
1,698,418	-				-0.4
1,698,451	-				-2.1
1,698,476	+				-0.9
1,698,484	-				+0.9
1,698,556	+		Shewana3_1464	0.11	+0.4
1,698,579	+		Shewana3_1464	0.11	+1.4
1,698,589	+		Shewana3_1464	0.11	+2.4
1,698,594	+		Shewana3_1464	0.11	+0.9
1,698,759	+		Shewana3_1464	0.15	+0.4
1,698,759	+		Shewana3_1464	0.15	+1.4
1,698,759	+		Shewana3_1464	0.15	+0.4
1,698,766	+		Shewana3_1464	0.15	+2.4
1,698,767	-		Shewana3_1464	0.15	-2.4
1,698,767	-		Shewana3_1464	0.15	-1.0
1,698,784	+		Shewana3_1464	0.16	+1.4
1,698,784	+		Shewana3_1464	0.16	+0.1
1,698,792	-		Shewana3_1464	0.16	+0.9
1,698,792	-		Shewana3_1464	0.16	+1.4
1,698,800	+		Shewana3_1464	0.16	-0.7
1,698,827	+		Shewana3_1464	0.17	+1.4
1,698,844	-		Shewana3_1464	0.17	+0.0
1,698,915	+		Shewana3_1464	0.19	-1.4
1,698,915	+		Shewana3_1464	0.19	-1.0
1,698,915	+		Shewana3_1464	0.19	-1.3
1,698,915	+		Shewana3_1464	0.19	-0.9
1,698,915	+		Shewana3_1464	0.19	-0.7
1,698,923	-		Shewana3_1464	0.19	+0.4
1,698,923	-		Shewana3_1464	0.19	-0.4
1,698,923	-		Shewana3_1464	0.19	+0.6
1,698,923	-		Shewana3_1464	0.19	-0.1
1,698,924	+		Shewana3_1464	0.19	+0.9
1,698,932	-		Shewana3_1464	0.19	-2.0
1,698,959	+		Shewana3_1464	0.20	+1.4
1,698,959	+		Shewana3_1464	0.20	-0.4
1,698,959	+		Shewana3_1464	0.20	+0.9
1,698,991	+		Shewana3_1464	0.21	+1.4