Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4224

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_4223 and Shewana3_4224 are separated by 120 nucleotidesShewana3_4224 and Shewana3_4225 are separated by 623 nucleotides Shewana3_4223: Shewana3_4223 - hypothetical protein (RefSeq), at 95,440 to 96,366 _4223 Shewana3_4224: Shewana3_4224 - hypothetical protein (RefSeq), at 96,487 to 96,696 _4224 Shewana3_4225: Shewana3_4225 - hypothetical protein (RefSeq), at 97,320 to 98,393 _4225 Position (kb) 96 97Strain fitness (log2 ratio) -1 0 1at 95.581 kb on + strand, within Shewana3_4223at 95.705 kb on + strand, within Shewana3_4223at 96.864 kb on + strandat 96.864 kb on + strandat 97.205 kb on + strandat 97.205 kb on + strandat 97.213 kb on - strandat 97.252 kb on - strandat 97.292 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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95,581 + Shewana3_4223 0.15 +1.2
95,705 + Shewana3_4223 0.29 +0.2
96,864 + -0.7
96,864 + -0.0
97,205 + +0.9
97,205 + +0.2
97,213 - +0.4
97,252 - +0.7
97,292 - -0.8

Or see this region's nucleotide sequence