Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00795 and H281DRAFT_00796 are separated by 85 nucleotides H281DRAFT_00796 and H281DRAFT_00797 are separated by 477 nucleotides
H281DRAFT_00795: H281DRAFT_00795 - inorganic phosphate transporter, PiT family, at 880,789 to 881,799
_00795
H281DRAFT_00796: H281DRAFT_00796 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 881,885 to 882,691
_00796
H281DRAFT_00797: H281DRAFT_00797 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167), at 883,169 to 884,095
_00797
Position (kb) 881
882
883 Strain fitness (log2 ratio) -1
0
1 at 881.016 kb on - strand, within H281DRAFT_00795 at 881.103 kb on - strand, within H281DRAFT_00795 at 881.278 kb on + strand, within H281DRAFT_00795 at 881.347 kb on + strand, within H281DRAFT_00795 at 881.347 kb on + strand, within H281DRAFT_00795 at 881.394 kb on + strand, within H281DRAFT_00795 at 881.474 kb on - strand, within H281DRAFT_00795 at 881.858 kb on - strand at 881.858 kb on - strand at 881.858 kb on - strand at 881.859 kb on + strand at 881.860 kb on - strand at 881.937 kb on + strand at 881.937 kb on + strand at 881.937 kb on + strand at 881.938 kb on - strand at 882.150 kb on + strand, within H281DRAFT_00796 at 882.153 kb on + strand, within H281DRAFT_00796 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.337 kb on - strand, within H281DRAFT_00796 at 882.399 kb on + strand, within H281DRAFT_00796 at 882.861 kb on - strand at 882.862 kb on + strand at 883.013 kb on - strand at 883.048 kb on + strand at 883.048 kb on + strand at 883.049 kb on - strand at 883.108 kb on + strand at 883.177 kb on - strand at 883.278 kb on + strand, within H281DRAFT_00797 at 883.639 kb on - strand, within H281DRAFT_00797 at 883.639 kb on - strand, within H281DRAFT_00797
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x remove 881,016 - H281DRAFT_00795 0.22 -0.8 881,103 - H281DRAFT_00795 0.31 -0.3 881,278 + H281DRAFT_00795 0.48 -0.4 881,347 + H281DRAFT_00795 0.55 -0.4 881,347 + H281DRAFT_00795 0.55 +1.0 881,394 + H281DRAFT_00795 0.60 -0.7 881,474 - H281DRAFT_00795 0.68 -0.2 881,858 - -1.1 881,858 - -1.0 881,858 - +0.6 881,859 + -1.4 881,860 - -1.5 881,937 + +0.1 881,937 + +0.1 881,937 + +0.5 881,938 - +0.3 882,150 + H281DRAFT_00796 0.33 -1.2 882,153 + H281DRAFT_00796 0.33 -0.2 882,337 - H281DRAFT_00796 0.56 -1.4 882,337 - H281DRAFT_00796 0.56 -0.1 882,399 + H281DRAFT_00796 0.64 -0.9 882,861 - +0.8 882,862 + -0.4 883,013 - -0.1 883,048 + +0.5 883,048 + +0.9 883,049 - -0.1 883,108 + +0.1 883,177 - +0.3 883,278 + H281DRAFT_00797 0.12 -0.7 883,639 - H281DRAFT_00797 0.51 +0.2 883,639 - H281DRAFT_00797 0.51 +1.0
Or see this region's nucleotide sequence