Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00142 and H281DRAFT_00143 are separated by 90 nucleotides H281DRAFT_00143 and H281DRAFT_00144 overlap by 8 nucleotides H281DRAFT_00144 and H281DRAFT_00145 overlap by 1 nucleotides
H281DRAFT_00142: H281DRAFT_00142 - iron complex transport system substrate-binding protein, at 147,406 to 148,326
_00142
H281DRAFT_00143: H281DRAFT_00143 - L-threonine O-3-phosphate decarboxylase, at 148,417 to 149,523
_00143
H281DRAFT_00144: H281DRAFT_00144 - adenosylcobinamide-phosphate synthase (EC 6.3.1.10), at 149,516 to 150,451
_00144
H281DRAFT_00145: H281DRAFT_00145 - adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase, at 150,451 to 151,005
_00145
Position (kb) 148
149
150 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 147.531 kb on + strand, within H281DRAFT_00142 at 147.716 kb on - strand, within H281DRAFT_00142 at 147.738 kb on + strand, within H281DRAFT_00142 at 147.738 kb on + strand, within H281DRAFT_00142 at 147.738 kb on + strand at 147.845 kb on + strand, within H281DRAFT_00142 at 147.955 kb on + strand, within H281DRAFT_00142 at 147.955 kb on + strand, within H281DRAFT_00142 at 147.956 kb on - strand, within H281DRAFT_00142 at 148.017 kb on + strand, within H281DRAFT_00142 at 148.018 kb on - strand, within H281DRAFT_00142 at 148.126 kb on + strand, within H281DRAFT_00142 at 148.190 kb on - strand, within H281DRAFT_00142 at 148.346 kb on + strand at 149.062 kb on + strand, within H281DRAFT_00143 at 149.062 kb on + strand, within H281DRAFT_00143 at 149.062 kb on + strand, within H281DRAFT_00143 at 149.062 kb on + strand, within H281DRAFT_00143 at 149.063 kb on - strand, within H281DRAFT_00143 at 149.124 kb on - strand, within H281DRAFT_00143 at 149.243 kb on + strand, within H281DRAFT_00143 at 149.581 kb on + strand at 149.582 kb on - strand at 149.582 kb on - strand at 149.582 kb on - strand at 149.674 kb on - strand, within H281DRAFT_00144 at 149.674 kb on - strand, within H281DRAFT_00144 at 150.322 kb on - strand, within H281DRAFT_00144
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x remove 147,531 + H281DRAFT_00142 0.14 -0.1 147,716 - H281DRAFT_00142 0.34 +0.3 147,738 + H281DRAFT_00142 0.36 +0.5 147,738 + H281DRAFT_00142 0.36 +2.4 147,738 + +3.0 147,845 + H281DRAFT_00142 0.48 -0.1 147,955 + H281DRAFT_00142 0.60 +0.1 147,955 + H281DRAFT_00142 0.60 -0.5 147,956 - H281DRAFT_00142 0.60 +0.9 148,017 + H281DRAFT_00142 0.66 -0.0 148,018 - H281DRAFT_00142 0.66 +0.7 148,126 + H281DRAFT_00142 0.78 -2.5 148,190 - H281DRAFT_00142 0.85 -0.5 148,346 + -0.2 149,062 + H281DRAFT_00143 0.58 -1.9 149,062 + H281DRAFT_00143 0.58 -1.5 149,062 + H281DRAFT_00143 0.58 -1.9 149,062 + H281DRAFT_00143 0.58 -0.9 149,063 - H281DRAFT_00143 0.58 -2.2 149,124 - H281DRAFT_00143 0.64 -0.6 149,243 + H281DRAFT_00143 0.75 -0.0 149,581 + -1.8 149,582 - +2.0 149,582 - -2.7 149,582 - -1.9 149,674 - H281DRAFT_00144 0.17 -2.2 149,674 - H281DRAFT_00144 0.17 +2.0 150,322 - H281DRAFT_00144 0.86 -0.6
Or see this region's nucleotide sequence