Experiment: LB 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_377 and Ac3H11_565 are separated by 48 nucleotides
Ac3H11_377 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 52,425 to 54,353
_377
Ac3H11_565 - tRNA-His-GTG, at 54,402 to 54,474
_565
Position (kb) 54
55 Strain fitness (log2 ratio) -1
0
1 at 54.710 kb on + strand at 54.754 kb on + strand at 54.755 kb on - strand at 54.766 kb on + strand at 54.767 kb on - strand at 54.767 kb on - strand at 54.791 kb on - strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.936 kb on - strand at 54.936 kb on - strand at 54.936 kb on - strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.104 kb on + strand at 55.145 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.215 kb on + strand at 55.216 kb on - strand at 55.305 kb on + strand at 55.306 kb on - strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.378 kb on + strand at 55.379 kb on - strand at 55.379 kb on - strand at 55.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 30C remove 54,710 + -0.5 54,754 + -0.7 54,755 - -0.0 54,766 + -0.3 54,767 - +0.4 54,767 - -0.7 54,791 - -1.2 54,795 + -0.3 54,795 + -1.0 54,795 + +0.1 54,795 + -1.4 54,796 - -0.5 54,796 - +0.2 54,796 - -0.4 54,796 - +0.8 54,796 - -0.3 54,796 - -1.0 54,796 - -0.8 54,929 + +0.3 54,929 + +0.8 54,929 + +0.4 54,929 + +0.2 54,929 + +0.6 54,929 + +0.4 54,929 + -0.0 54,929 + -0.6 54,929 + +0.2 54,930 - -0.1 54,930 - -1.1 54,930 - +0.1 54,930 - -0.2 54,930 - +0.1 54,935 + +1.5 54,935 + -0.7 54,935 + +0.1 54,935 + -0.6 54,936 - -1.2 54,936 - +1.7 54,936 - -0.6 55,102 + +0.5 55,102 + -0.1 55,102 + -0.0 55,102 + -0.4 55,102 + -1.3 55,102 + +0.3 55,103 - -0.1 55,103 - +0.3 55,103 - -0.2 55,103 - +0.2 55,103 - +0.7 55,103 - +0.4 55,103 - -0.0 55,103 - -0.2 55,103 - +0.2 55,104 + +0.5 55,145 + +0.0 55,213 + -1.0 55,213 + -0.1 55,213 + +1.7 55,213 + -0.3 55,213 + +0.4 55,213 + +0.3 55,214 - +0.4 55,214 - +0.1 55,214 - +0.0 55,214 - -0.2 55,214 - -0.4 55,214 - -1.1 55,215 + +0.1 55,216 - -0.1 55,305 + -0.1 55,306 - +0.6 55,364 + -0.2 55,364 + +0.3 55,364 + -0.4 55,364 + +0.4 55,364 + -0.0 55,365 - +0.1 55,365 - -0.8 55,365 - +0.8 55,365 - +0.9 55,378 + -0.5 55,379 - -0.4 55,379 - +0.7 55,379 - +0.1
Or see this region's nucleotide sequence