Experiment: LB 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3392 and Ac3H11_3393 are separated by 65 nucleotides Ac3H11_3393 and Ac3H11_3394 are separated by 187 nucleotides Ac3H11_3394 and Ac3H11_3395 are separated by 20 nucleotides Ac3H11_3395 and Ac3H11_3396 are separated by 17 nucleotides
Ac3H11_3392 - Transcriptional regulator, DeoR family, at 71,137 to 71,877
_3392
Ac3H11_3393 - Probable transcription regulator, at 71,943 to 72,434
_3393
Ac3H11_3394 - hypothetical protein, at 72,622 to 72,789
_3394
Ac3H11_3395 - alpha/beta hydrolase fold, at 72,810 to 73,448
_3395
Ac3H11_3396 - ProQ: influences osmotic activation of compatible solute ProP, at 73,466 to 74,437
_3396
Position (kb) 72
73
74 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 71.899 kb on + strand at 71.930 kb on - strand at 71.989 kb on + strand at 71.990 kb on - strand at 71.990 kb on - strand at 71.990 kb on - strand at 71.990 kb on - strand at 72.043 kb on + strand, within Ac3H11_3393 at 72.043 kb on + strand, within Ac3H11_3393 at 72.043 kb on + strand, within Ac3H11_3393 at 72.043 kb on + strand, within Ac3H11_3393 at 72.112 kb on + strand, within Ac3H11_3393 at 72.112 kb on + strand, within Ac3H11_3393 at 72.112 kb on + strand, within Ac3H11_3393 at 72.113 kb on - strand, within Ac3H11_3393 at 72.113 kb on - strand, within Ac3H11_3393 at 72.113 kb on - strand, within Ac3H11_3393 at 72.113 kb on - strand, within Ac3H11_3393 at 72.135 kb on - strand, within Ac3H11_3393 at 72.239 kb on - strand, within Ac3H11_3393 at 72.239 kb on - strand, within Ac3H11_3393 at 72.239 kb on - strand, within Ac3H11_3393 at 72.239 kb on - strand, within Ac3H11_3393 at 72.759 kb on - strand, within Ac3H11_3394 at 72.777 kb on + strand at 72.778 kb on - strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.849 kb on - strand at 73.121 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.179 kb on + strand, within Ac3H11_3395 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.751 kb on + strand, within Ac3H11_3396 at 73.764 kb on + strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.864 kb on - strand, within Ac3H11_3396 at 73.966 kb on - strand, within Ac3H11_3396
Per-strain Table
Position Strand Gene LocusTag Fraction LB 30C remove 71,899 + -1.9 71,930 - +0.0 71,989 + -0.3 71,990 - +0.4 71,990 - -0.1 71,990 - +0.1 71,990 - -0.2 72,043 + Ac3H11_3393 0.20 +0.0 72,043 + Ac3H11_3393 0.20 -0.3 72,043 + Ac3H11_3393 0.20 -0.6 72,043 + Ac3H11_3393 0.20 -0.3 72,112 + Ac3H11_3393 0.34 -0.7 72,112 + Ac3H11_3393 0.34 +0.5 72,112 + Ac3H11_3393 0.34 -0.3 72,113 - Ac3H11_3393 0.35 +0.3 72,113 - Ac3H11_3393 0.35 +0.0 72,113 - Ac3H11_3393 0.35 -2.6 72,113 - Ac3H11_3393 0.35 +0.3 72,135 - Ac3H11_3393 0.39 -0.5 72,239 - Ac3H11_3393 0.60 +1.0 72,239 - Ac3H11_3393 0.60 +3.1 72,239 - Ac3H11_3393 0.60 -0.2 72,239 - Ac3H11_3393 0.60 -1.1 72,759 - Ac3H11_3394 0.82 +0.9 72,777 + +0.5 72,778 - +0.0 72,848 + -1.1 72,848 + +0.4 72,848 + +0.0 72,848 + +0.1 72,849 - -0.0 73,121 + Ac3H11_3395 0.49 -1.1 73,165 + Ac3H11_3395 0.56 -0.3 73,165 + Ac3H11_3395 0.56 -0.4 73,165 + Ac3H11_3395 0.56 -0.2 73,165 + Ac3H11_3395 0.56 -0.1 73,179 + Ac3H11_3395 0.58 -0.6 73,614 + Ac3H11_3396 0.15 -0.1 73,614 + Ac3H11_3396 0.15 -0.7 73,614 + Ac3H11_3396 0.15 -0.7 73,614 + Ac3H11_3396 0.15 +0.3 73,614 + Ac3H11_3396 0.15 -0.1 73,614 + Ac3H11_3396 0.15 -0.3 73,614 + Ac3H11_3396 0.15 -1.2 73,614 + Ac3H11_3396 0.15 +0.1 73,614 + Ac3H11_3396 0.15 -0.7 73,615 - Ac3H11_3396 0.15 -0.1 73,615 - Ac3H11_3396 0.15 -0.7 73,615 - Ac3H11_3396 0.15 +0.4 73,615 - Ac3H11_3396 0.15 -0.3 73,615 - Ac3H11_3396 0.15 -0.2 73,615 - Ac3H11_3396 0.15 -0.2 73,751 + Ac3H11_3396 0.29 -1.3 73,764 + Ac3H11_3396 0.31 -0.9 73,765 - Ac3H11_3396 0.31 +0.0 73,765 - Ac3H11_3396 0.31 -0.4 73,765 - Ac3H11_3396 0.31 -0.8 73,864 - Ac3H11_3396 0.41 -1.0 73,966 - Ac3H11_3396 0.51 -0.5
Or see this region's nucleotide sequence