Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17670 and AO353_17675 are separated by 17 nucleotides AO353_17675 and AO353_17680 are separated by 4 nucleotides AO353_17680 and AO353_17685 are separated by 28 nucleotides
AO353_17670: AO353_17670 - 4-hydroxy-tetrahydrodipicolinate synthase, at 3,893,560 to 3,894,438
_17670
AO353_17675: AO353_17675 - hypothetical protein, at 3,894,456 to 3,895,571
_17675
AO353_17680: AO353_17680 - MBL fold metallo-hydrolase, at 3,895,576 to 3,896,334
_17680
AO353_17685: AO353_17685 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 3,896,363 to 3,897,073
_17685
Position (kb)
3894
3895
3896 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3893.491 kb on + strand at 3893.491 kb on + strand at 3893.492 kb on - strand at 3893.492 kb on - strand at 3894.428 kb on + strand at 3894.428 kb on + strand at 3894.448 kb on + strand at 3894.448 kb on + strand at 3894.449 kb on - strand at 3894.494 kb on + strand at 3894.564 kb on + strand at 3894.564 kb on + strand at 3894.614 kb on + strand, within AO353_17675 at 3894.614 kb on + strand, within AO353_17675 at 3894.684 kb on + strand, within AO353_17675 at 3894.735 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.011 kb on + strand, within AO353_17675 at 3895.012 kb on - strand, within AO353_17675 at 3895.012 kb on - strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.332 kb on + strand, within AO353_17675 at 3895.333 kb on - strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.335 kb on + strand, within AO353_17675 at 3895.480 kb on + strand at 3895.480 kb on + strand at 3895.480 kb on + strand at 3895.480 kb on + strand at 3895.481 kb on - strand at 3895.602 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.642 kb on + strand at 3895.643 kb on - strand at 3895.643 kb on - strand at 3895.643 kb on - strand at 3895.643 kb on - strand at 3895.643 kb on - strand at 3895.706 kb on + strand, within AO353_17680 at 3895.706 kb on + strand, within AO353_17680 at 3895.706 kb on + strand, within AO353_17680 at 3895.706 kb on + strand, within AO353_17680 at 3895.707 kb on - strand, within AO353_17680 at 3895.789 kb on + strand, within AO353_17680 at 3895.789 kb on + strand, within AO353_17680 at 3895.790 kb on - strand, within AO353_17680 at 3895.804 kb on + strand, within AO353_17680 at 3895.804 kb on + strand, within AO353_17680 at 3895.805 kb on - strand, within AO353_17680 at 3895.945 kb on + strand, within AO353_17680 at 3895.945 kb on + strand, within AO353_17680 at 3895.945 kb on + strand, within AO353_17680 at 3895.945 kb on + strand, within AO353_17680 at 3895.945 kb on + strand, within AO353_17680 at 3895.946 kb on - strand, within AO353_17680 at 3895.999 kb on + strand, within AO353_17680 at 3895.999 kb on + strand, within AO353_17680 at 3896.095 kb on + strand, within AO353_17680 at 3896.198 kb on + strand, within AO353_17680 at 3896.199 kb on - strand, within AO353_17680 at 3896.325 kb on + strand at 3896.325 kb on + strand at 3896.325 kb on + strand at 3896.325 kb on + strand at 3896.326 kb on - strand at 3896.326 kb on - strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.341 kb on + strand at 3896.342 kb on - strand at 3896.342 kb on - strand at 3896.345 kb on + strand at 3896.345 kb on + strand at 3896.345 kb on + strand at 3896.345 kb on + strand at 3896.345 kb on + strand at 3896.345 kb on + strand at 3896.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,893,491 + -0.3 3,893,491 + -2.2 3,893,492 - -0.6 3,893,492 - +0.7 3,894,428 + -1.3 3,894,428 + +0.4 3,894,448 + -1.7 3,894,448 + -0.6 3,894,449 - -1.1 3,894,494 + -0.7 3,894,564 + -1.6 3,894,564 + +0.5 3,894,614 + AO353_17675 0.14 -0.8 3,894,614 + AO353_17675 0.14 -0.7 3,894,684 + AO353_17675 0.20 -1.6 3,894,735 + AO353_17675 0.25 -2.7 3,895,011 + AO353_17675 0.50 +0.7 3,895,011 + AO353_17675 0.50 -1.8 3,895,011 + AO353_17675 0.50 -2.1 3,895,012 - AO353_17675 0.50 -1.3 3,895,012 - AO353_17675 0.50 +1.3 3,895,332 + AO353_17675 0.78 -0.4 3,895,332 + AO353_17675 0.78 -0.3 3,895,332 + AO353_17675 0.78 -1.3 3,895,332 + AO353_17675 0.78 -2.0 3,895,333 - AO353_17675 0.79 -0.6 3,895,335 + AO353_17675 0.79 -1.4 3,895,335 + AO353_17675 0.79 -1.3 3,895,335 + AO353_17675 0.79 -0.6 3,895,335 + AO353_17675 0.79 -0.6 3,895,335 + AO353_17675 0.79 -1.3 3,895,335 + AO353_17675 0.79 -2.2 3,895,335 + AO353_17675 0.79 -1.6 3,895,335 + AO353_17675 0.79 +0.0 3,895,480 + -1.4 3,895,480 + -1.8 3,895,480 + -0.8 3,895,480 + -0.6 3,895,481 - -1.8 3,895,602 + +0.3 3,895,642 + -1.1 3,895,642 + +0.2 3,895,642 + -1.4 3,895,642 + -0.6 3,895,642 + -0.8 3,895,642 + -0.4 3,895,642 + -1.7 3,895,642 + -1.3 3,895,643 - +1.5 3,895,643 - -0.8 3,895,643 - +0.3 3,895,643 - -0.1 3,895,643 - +1.0 3,895,706 + AO353_17680 0.17 +0.3 3,895,706 + AO353_17680 0.17 +0.0 3,895,706 + AO353_17680 0.17 +2.0 3,895,706 + AO353_17680 0.17 -0.8 3,895,707 - AO353_17680 0.17 +2.0 3,895,789 + AO353_17680 0.28 -1.1 3,895,789 + AO353_17680 0.28 -0.9 3,895,790 - AO353_17680 0.28 +0.6 3,895,804 + AO353_17680 0.30 +0.5 3,895,804 + AO353_17680 0.30 +0.0 3,895,805 - AO353_17680 0.30 +0.4 3,895,945 + AO353_17680 0.49 -0.3 3,895,945 + AO353_17680 0.49 -0.4 3,895,945 + AO353_17680 0.49 +0.7 3,895,945 + AO353_17680 0.49 -1.4 3,895,945 + AO353_17680 0.49 -0.3 3,895,946 - AO353_17680 0.49 +2.3 3,895,999 + AO353_17680 0.56 +0.0 3,895,999 + AO353_17680 0.56 +1.6 3,896,095 + AO353_17680 0.68 -0.1 3,896,198 + AO353_17680 0.82 -0.3 3,896,199 - AO353_17680 0.82 +2.2 3,896,325 + -0.4 3,896,325 + +2.5 3,896,325 + -0.1 3,896,325 + -0.5 3,896,326 - +1.1 3,896,326 - +1.6 3,896,341 + -0.6 3,896,341 + -0.1 3,896,341 + -1.7 3,896,341 + +0.6 3,896,341 + +1.3 3,896,341 + +0.4 3,896,341 + +0.9 3,896,342 - +3.0 3,896,342 - -1.1 3,896,345 + -0.3 3,896,345 + -1.6 3,896,345 + +0.4 3,896,345 + -1.8 3,896,345 + -1.3 3,896,345 + -0.8 3,896,346 - +1.4
Or see this region's nucleotide sequence