Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16850 and AO353_16855 are separated by 111 nucleotides AO353_16855 and AO353_16860 are separated by 248 nucleotides AO353_16860 and AO353_16865 are separated by 67 nucleotides
AO353_16850: AO353_16850 - ferredoxin-NADP reductase, at 3,728,725 to 3,729,504
_16850
AO353_16855: AO353_16855 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 3,729,616 to 3,730,314
_16855
AO353_16860: AO353_16860 - hypothetical protein, at 3,730,563 to 3,731,030
_16860
AO353_16865: AO353_16865 - RNA-binding protein, at 3,731,098 to 3,731,808
_16865
Position (kb)
3729
3730
3731 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3728.634 kb on + strand at 3728.634 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.707 kb on + strand, within AO353_16855 at 3729.708 kb on - strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.811 kb on - strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3730.071 kb on + strand, within AO353_16855 at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.350 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.630 kb on + strand, within AO353_16860 at 3730.630 kb on + strand at 3730.631 kb on - strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.876 kb on - strand, within AO353_16860 at 3730.876 kb on - strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.997 kb on - strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.099 kb on + strand at 3731.100 kb on - strand at 3731.100 kb on - strand at 3731.123 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,728,634 + +0.8 3,728,634 + -1.7 3,728,649 + -0.8 3,728,649 + -0.5 3,728,649 + +0.7 3,729,502 + -0.3 3,729,502 + +0.7 3,729,502 + -2.7 3,729,502 + +0.2 3,729,502 + +0.7 3,729,502 + +0.9 3,729,502 + -2.7 3,729,502 + -0.9 3,729,502 + -1.6 3,729,503 - +1.1 3,729,503 - -1.0 3,729,503 - +0.2 3,729,503 - -1.8 3,729,503 - +1.1 3,729,503 - +0.5 3,729,503 - -0.5 3,729,679 + -0.3 3,729,679 + -0.3 3,729,679 + -0.2 3,729,679 + -1.0 3,729,679 + +1.8 3,729,679 + +0.8 3,729,679 + -0.3 3,729,680 - +0.2 3,729,680 - +0.2 3,729,680 - +1.4 3,729,680 - -1.9 3,729,707 + AO353_16855 0.13 -2.0 3,729,708 - AO353_16855 0.13 +0.5 3,729,810 + AO353_16855 0.28 -0.6 3,729,810 + AO353_16855 0.28 -0.5 3,729,811 - AO353_16855 0.28 -0.1 3,729,917 + AO353_16855 0.43 -1.0 3,729,917 + AO353_16855 0.43 -2.5 3,729,918 - AO353_16855 0.43 +0.7 3,729,918 - AO353_16855 0.43 +1.2 3,729,942 + AO353_16855 0.47 -2.2 3,729,942 + AO353_16855 0.47 -0.8 3,730,071 + AO353_16855 0.65 -1.1 3,730,307 + -0.9 3,730,307 + -1.0 3,730,307 + -1.2 3,730,307 + -0.8 3,730,307 + +0.1 3,730,307 + -0.4 3,730,307 + +0.4 3,730,307 + -0.4 3,730,308 - +0.8 3,730,308 - -0.2 3,730,308 - -0.7 3,730,308 - -0.1 3,730,308 - +0.5 3,730,308 - -0.4 3,730,308 - -0.5 3,730,308 - -0.7 3,730,308 - -0.4 3,730,308 - -0.8 3,730,308 - -1.1 3,730,350 + -0.2 3,730,440 + +0.8 3,730,440 + -0.0 3,730,440 + -1.0 3,730,440 + -0.1 3,730,440 + -0.0 3,730,440 + -0.3 3,730,440 + +0.7 3,730,440 + -1.4 3,730,440 + -1.5 3,730,441 - -0.2 3,730,441 - +1.8 3,730,441 - -0.2 3,730,441 - -1.2 3,730,441 - -0.5 3,730,630 + AO353_16860 0.14 -0.1 3,730,630 + +1.0 3,730,631 - AO353_16860 0.15 -0.2 3,730,875 + AO353_16860 0.67 -0.0 3,730,875 + AO353_16860 0.67 -0.7 3,730,875 + AO353_16860 0.67 -1.8 3,730,876 - AO353_16860 0.67 -0.2 3,730,876 - AO353_16860 0.67 -0.2 3,730,912 + AO353_16860 0.75 +0.6 3,730,912 + AO353_16860 0.75 +0.7 3,730,912 + AO353_16860 0.75 +0.5 3,730,912 + AO353_16860 0.75 -1.4 3,730,912 + AO353_16860 0.75 +2.1 3,730,913 - AO353_16860 0.75 -1.8 3,730,913 - AO353_16860 0.75 -0.4 3,730,913 - AO353_16860 0.75 +0.4 3,730,913 - AO353_16860 0.75 -0.2 3,730,996 + -0.2 3,730,996 + -1.9 3,730,996 + +1.4 3,730,996 + -0.1 3,730,996 + -1.2 3,730,996 + +0.8 3,730,996 + -1.0 3,730,997 - +1.2 3,731,013 + +0.8 3,731,013 + -1.8 3,731,013 + +1.0 3,731,014 - +0.6 3,731,014 - +0.2 3,731,014 - -1.4 3,731,014 - -0.7 3,731,099 + -0.0 3,731,100 - -1.0 3,731,100 - +0.7 3,731,123 + -0.2
Or see this region's nucleotide sequence