Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14085 and AO353_14090 are separated by 205 nucleotides AO353_14090 and AO353_14095 are separated by 194 nucleotides AO353_14095 and AO353_14100 are separated by 240 nucleotides AO353_14100 and AO353_14105 are separated by 35 nucleotides
AO353_14085: AO353_14085 - hypothetical protein, at 3,131,504 to 3,131,761
_14085
AO353_14090: AO353_14090 - alkylphosphonate utilization protein, at 3,131,967 to 3,132,308
_14090
AO353_14095: AO353_14095 - octaprenyl-diphosphate synthase, at 3,132,503 to 3,133,471
_14095
AO353_14100: AO353_14100 - 50S ribosomal protein L21, at 3,133,712 to 3,134,026
_14100
AO353_14105: AO353_14105 - 50S ribosomal protein L27, at 3,134,062 to 3,134,319
_14105
Position (kb)
3132
3133
3134 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3131.507 kb on + strand at 3131.507 kb on + strand at 3131.507 kb on + strand at 3131.507 kb on + strand at 3131.507 kb on + strand at 3131.508 kb on - strand at 3131.508 kb on - strand at 3131.557 kb on - strand, within AO353_14085 at 3131.564 kb on + strand, within AO353_14085 at 3131.564 kb on + strand, within AO353_14085 at 3131.564 kb on + strand, within AO353_14085 at 3131.565 kb on - strand, within AO353_14085 at 3131.565 kb on - strand, within AO353_14085 at 3131.718 kb on + strand, within AO353_14085 at 3131.718 kb on + strand, within AO353_14085 at 3131.718 kb on + strand, within AO353_14085 at 3131.719 kb on - strand, within AO353_14085 at 3131.719 kb on - strand, within AO353_14085 at 3131.719 kb on - strand, within AO353_14085 at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.754 kb on + strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.755 kb on - strand at 3131.779 kb on + strand at 3131.780 kb on - strand at 3131.811 kb on + strand at 3131.815 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.822 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.826 kb on - strand at 3131.850 kb on + strand at 3131.850 kb on + strand at 3131.890 kb on - strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.957 kb on + strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3131.958 kb on - strand at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.262 kb on + strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.263 kb on - strand, within AO353_14090 at 3132.268 kb on + strand, within AO353_14090 at 3132.268 kb on + strand, within AO353_14090 at 3132.268 kb on + strand, within AO353_14090 at 3132.269 kb on - strand, within AO353_14090 at 3132.269 kb on - strand, within AO353_14090 at 3132.309 kb on + strand at 3132.309 kb on + strand at 3132.309 kb on + strand at 3132.310 kb on - strand at 3132.310 kb on - strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.347 kb on + strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.348 kb on - strand at 3132.349 kb on + strand at 3132.349 kb on + strand at 3132.349 kb on + strand at 3132.349 kb on + strand at 3132.350 kb on - strand at 3132.350 kb on - strand at 3132.351 kb on + strand at 3132.352 kb on - strand at 3132.352 kb on - strand at 3132.359 kb on + strand at 3132.428 kb on + strand at 3132.428 kb on + strand at 3132.428 kb on + strand at 3132.428 kb on + strand at 3132.429 kb on - strand at 3132.429 kb on - strand at 3132.429 kb on - strand at 3132.429 kb on - strand at 3132.429 kb on - strand at 3133.509 kb on - strand at 3134.398 kb on + strand at 3134.398 kb on + strand at 3134.419 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand at 3134.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,131,507 + +0.1 3,131,507 + -2.4 3,131,507 + -0.2 3,131,507 + -0.6 3,131,507 + -0.9 3,131,508 - +0.4 3,131,508 - +0.7 3,131,557 - AO353_14085 0.21 +0.1 3,131,564 + AO353_14085 0.23 -1.6 3,131,564 + AO353_14085 0.23 +0.2 3,131,564 + AO353_14085 0.23 +0.2 3,131,565 - AO353_14085 0.24 +2.1 3,131,565 - AO353_14085 0.24 -0.5 3,131,718 + AO353_14085 0.83 -0.3 3,131,718 + AO353_14085 0.83 +0.4 3,131,718 + AO353_14085 0.83 +0.4 3,131,719 - AO353_14085 0.83 -0.2 3,131,719 - AO353_14085 0.83 -0.1 3,131,719 - AO353_14085 0.83 +0.7 3,131,754 + -0.7 3,131,754 + -2.3 3,131,754 + -0.7 3,131,754 + -0.7 3,131,754 + +1.8 3,131,754 + -0.0 3,131,754 + +0.2 3,131,754 + +0.2 3,131,754 + -1.1 3,131,754 + -0.3 3,131,754 + +0.0 3,131,754 + +0.0 3,131,754 + -0.3 3,131,754 + +1.4 3,131,754 + -0.4 3,131,754 + -0.3 3,131,754 + -0.1 3,131,754 + +0.3 3,131,754 + -0.4 3,131,755 - -1.0 3,131,755 - +0.2 3,131,755 - -0.7 3,131,755 - -1.6 3,131,755 - +0.6 3,131,755 - +1.1 3,131,755 - -0.9 3,131,755 - +0.2 3,131,755 - +0.1 3,131,755 - -0.5 3,131,755 - +0.1 3,131,755 - +1.0 3,131,755 - -2.1 3,131,755 - -0.3 3,131,779 + -0.2 3,131,780 - -0.1 3,131,811 + -0.0 3,131,815 - -1.3 3,131,822 - -0.0 3,131,822 - +1.4 3,131,822 - -0.4 3,131,822 - -0.3 3,131,822 - -0.9 3,131,822 - -0.0 3,131,822 - +1.6 3,131,822 - -0.4 3,131,822 - -1.6 3,131,822 - +1.0 3,131,822 - -0.8 3,131,826 - -0.4 3,131,826 - -1.3 3,131,826 - +0.5 3,131,826 - -1.4 3,131,826 - +0.9 3,131,826 - +1.2 3,131,826 - +0.8 3,131,826 - +0.8 3,131,826 - -0.3 3,131,826 - -1.5 3,131,826 - +0.3 3,131,826 - -0.2 3,131,826 - -2.2 3,131,826 - -0.2 3,131,826 - -0.9 3,131,826 - -0.2 3,131,850 + +1.7 3,131,850 + -0.3 3,131,890 - +0.3 3,131,957 + -0.2 3,131,957 + +0.7 3,131,957 + -0.5 3,131,957 + +1.0 3,131,957 + -0.3 3,131,957 + +0.6 3,131,957 + -0.7 3,131,957 + +0.5 3,131,958 - -1.9 3,131,958 - -0.8 3,131,958 - +1.2 3,131,958 - -0.3 3,131,958 - +0.3 3,131,958 - +0.9 3,131,958 - -0.5 3,131,958 - +0.4 3,132,262 + AO353_14090 0.86 -0.8 3,132,262 + AO353_14090 0.86 +0.2 3,132,262 + AO353_14090 0.86 +0.3 3,132,262 + AO353_14090 0.86 -0.1 3,132,262 + AO353_14090 0.86 +0.8 3,132,262 + AO353_14090 0.86 +0.9 3,132,262 + AO353_14090 0.86 -0.4 3,132,262 + AO353_14090 0.86 -0.4 3,132,262 + AO353_14090 0.86 -0.0 3,132,262 + AO353_14090 0.86 +1.3 3,132,262 + AO353_14090 0.86 +0.1 3,132,262 + AO353_14090 0.86 -1.3 3,132,262 + AO353_14090 0.86 +0.1 3,132,263 - AO353_14090 0.87 -1.5 3,132,263 - AO353_14090 0.87 -1.3 3,132,263 - AO353_14090 0.87 -0.3 3,132,263 - AO353_14090 0.87 -1.2 3,132,263 - +1.9 3,132,263 - AO353_14090 0.87 -0.4 3,132,263 - AO353_14090 0.87 +0.6 3,132,263 - AO353_14090 0.87 +0.9 3,132,263 - AO353_14090 0.87 -1.1 3,132,263 - AO353_14090 0.87 -1.4 3,132,263 - AO353_14090 0.87 -0.1 3,132,263 - AO353_14090 0.87 -0.3 3,132,263 - AO353_14090 0.87 -0.3 3,132,268 + AO353_14090 0.88 +1.1 3,132,268 + AO353_14090 0.88 +1.9 3,132,268 + AO353_14090 0.88 +0.7 3,132,269 - AO353_14090 0.88 -0.7 3,132,269 - AO353_14090 0.88 +0.1 3,132,309 + +0.4 3,132,309 + +0.9 3,132,309 + -0.2 3,132,310 - -0.5 3,132,310 - +0.8 3,132,347 + +1.9 3,132,347 + +0.7 3,132,347 + +0.8 3,132,347 + +0.3 3,132,347 + +0.1 3,132,347 + -0.6 3,132,347 + +0.1 3,132,347 + -0.1 3,132,347 + -0.7 3,132,348 - -0.4 3,132,348 - -0.1 3,132,348 - +0.3 3,132,348 - +1.2 3,132,348 - -1.1 3,132,348 - -0.6 3,132,348 - +0.4 3,132,348 - -0.1 3,132,348 - -1.9 3,132,348 - -0.2 3,132,348 - +0.7 3,132,348 - +0.6 3,132,348 - -1.3 3,132,348 - -0.1 3,132,349 + +0.0 3,132,349 + -0.4 3,132,349 + -0.4 3,132,349 + +0.6 3,132,350 - +1.8 3,132,350 - -0.1 3,132,351 + +0.9 3,132,352 - -1.8 3,132,352 - -1.9 3,132,359 + -0.7 3,132,428 + +1.5 3,132,428 + -0.0 3,132,428 + -1.1 3,132,428 + -0.6 3,132,429 - +0.5 3,132,429 - +1.9 3,132,429 - -0.2 3,132,429 - +0.5 3,132,429 - -0.1 3,133,509 - +1.9 3,134,398 + +0.3 3,134,398 + +1.3 3,134,419 + -0.0 3,134,466 + -0.7 3,134,466 + +1.3 3,134,466 + -0.7 3,134,466 + -1.4 3,134,466 + -0.3 3,134,466 + -1.0 3,134,466 + -0.5 3,134,466 + -0.1 3,134,466 + -2.1 3,134,466 + -0.3
Or see this region's nucleotide sequence