Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03650 and AO353_03655 are separated by 2 nucleotides AO353_03655 and AO353_03660 are separated by 144 nucleotides AO353_03660 and AO353_03665 overlap by 4 nucleotides AO353_03665 and AO353_03670 are separated by 96 nucleotides
AO353_03650: AO353_03650 - histidine kinase, at 777,968 to 780,007
_03650
AO353_03655: AO353_03655 - cobalamin adenosyltransferase, at 780,010 to 780,591
_03655
AO353_03660: AO353_03660 - hypothetical protein, at 780,736 to 781,677
_03660
AO353_03665: AO353_03665 - glutathione S-transferase, at 781,674 to 782,306
_03665
AO353_03670: AO353_03670 - ornithine acetyltransferase, at 782,403 to 783,620
_03670
Position (kb) 780
781
782 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 780.006 kb on - strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.034 kb on + strand at 780.035 kb on - strand at 780.035 kb on - strand at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.274 kb on + strand, within AO353_03655 at 780.275 kb on - strand at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.275 kb on - strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.484 kb on + strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.485 kb on - strand, within AO353_03655 at 780.639 kb on + strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.646 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.666 kb on - strand at 780.690 kb on + strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.691 kb on - strand at 780.826 kb on + strand at 780.827 kb on - strand at 780.827 kb on - strand at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.034 kb on + strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.035 kb on - strand, within AO353_03660 at 781.179 kb on - strand, within AO353_03660 at 781.283 kb on + strand, within AO353_03660 at 781.340 kb on + strand, within AO353_03660 at 781.660 kb on + strand at 781.660 kb on + strand at 781.660 kb on + strand at 781.661 kb on - strand at 781.661 kb on - strand at 781.661 kb on - strand at 781.661 kb on - strand at 781.661 kb on - strand at 781.684 kb on - strand at 781.684 kb on - strand at 781.692 kb on + strand at 781.732 kb on + strand at 781.732 kb on + strand at 781.733 kb on - strand at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.747 kb on + strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.748 kb on - strand, within AO353_03665 at 781.758 kb on + strand, within AO353_03665 at 781.759 kb on - strand, within AO353_03665 at 781.759 kb on - strand, within AO353_03665 at 781.780 kb on + strand, within AO353_03665 at 781.780 kb on + strand, within AO353_03665 at 781.780 kb on + strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.781 kb on - strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.784 kb on + strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.785 kb on - strand, within AO353_03665 at 781.800 kb on + strand, within AO353_03665 at 781.800 kb on + strand, within AO353_03665 at 781.800 kb on + strand, within AO353_03665 at 781.800 kb on + strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.801 kb on - strand, within AO353_03665 at 781.830 kb on + strand, within AO353_03665 at 781.831 kb on - strand, within AO353_03665 at 781.831 kb on - strand, within AO353_03665 at 781.976 kb on + strand, within AO353_03665 at 781.977 kb on - strand, within AO353_03665 at 781.977 kb on - strand, within AO353_03665 at 782.087 kb on - strand, within AO353_03665 at 782.087 kb on - strand, within AO353_03665 at 782.218 kb on + strand, within AO353_03665 at 782.218 kb on + strand, within AO353_03665 at 782.218 kb on + strand, within AO353_03665 at 782.218 kb on + strand, within AO353_03665 at 782.219 kb on - strand, within AO353_03665 at 782.219 kb on - strand, within AO353_03665 at 782.272 kb on + strand at 782.272 kb on + strand at 782.272 kb on + strand at 782.272 kb on + strand at 782.273 kb on - strand at 782.273 kb on - strand at 782.299 kb on + strand at 782.299 kb on + strand at 782.299 kb on + strand at 782.299 kb on + strand at 782.299 kb on + strand at 782.299 kb on + strand at 782.300 kb on - strand at 782.300 kb on - strand at 782.300 kb on - strand at 782.300 kb on - strand at 782.300 kb on - strand at 782.376 kb on - strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.404 kb on + strand at 782.405 kb on - strand at 782.405 kb on - strand at 782.405 kb on - strand at 782.434 kb on + strand at 782.434 kb on + strand at 782.434 kb on + strand at 782.434 kb on + strand at 782.434 kb on + strand at 782.435 kb on - strand at 782.435 kb on - strand at 782.435 kb on - strand at 782.435 kb on - strand at 782.435 kb on - strand at 782.523 kb on + strand at 782.524 kb on - strand at 782.548 kb on + strand, within AO353_03670 at 782.548 kb on + strand, within AO353_03670 at 782.548 kb on + strand, within AO353_03670 at 782.548 kb on + strand, within AO353_03670 at 782.549 kb on - strand, within AO353_03670 at 782.549 kb on - strand, within AO353_03670 at 782.549 kb on - strand, within AO353_03670 at 782.549 kb on - strand, within AO353_03670 at 782.549 kb on - strand, within AO353_03670
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 780,006 - -0.7 780,034 + +0.6 780,034 + +0.1 780,034 + -0.7 780,035 - +1.4 780,035 - +0.5 780,274 + AO353_03655 0.45 -0.2 780,274 + AO353_03655 0.45 -0.4 780,274 + AO353_03655 0.45 +0.1 780,274 + AO353_03655 0.45 -0.6 780,274 + AO353_03655 0.45 +1.6 780,274 + AO353_03655 0.45 -2.8 780,275 - +1.2 780,275 - AO353_03655 0.46 -1.3 780,275 - AO353_03655 0.46 +1.2 780,275 - AO353_03655 0.46 +0.2 780,275 - AO353_03655 0.46 -1.2 780,484 + AO353_03655 0.81 -0.2 780,484 + AO353_03655 0.81 +0.8 780,484 + AO353_03655 0.81 -0.1 780,485 - AO353_03655 0.82 -0.5 780,485 - AO353_03655 0.82 +1.0 780,485 - AO353_03655 0.82 +0.6 780,639 + -0.4 780,640 - +0.7 780,640 - +1.3 780,640 - -0.3 780,646 - +0.2 780,666 - -0.2 780,666 - +0.6 780,666 - -0.3 780,666 - +0.3 780,690 + +0.2 780,691 - -0.2 780,691 - +0.1 780,691 - -0.8 780,826 + +0.1 780,827 - +0.9 780,827 - -0.1 781,034 + AO353_03660 0.32 -0.5 781,034 + AO353_03660 0.32 -0.2 781,034 + AO353_03660 0.32 +1.3 781,034 + AO353_03660 0.32 +1.6 781,034 + AO353_03660 0.32 -1.3 781,035 - AO353_03660 0.32 -0.5 781,035 - AO353_03660 0.32 +0.9 781,035 - AO353_03660 0.32 +0.9 781,035 - AO353_03660 0.32 +1.4 781,179 - AO353_03660 0.47 -0.4 781,283 + AO353_03660 0.58 -0.1 781,340 + AO353_03660 0.64 -0.5 781,660 + -1.2 781,660 + -2.1 781,660 + -0.7 781,661 - -0.8 781,661 - -1.2 781,661 - -0.8 781,661 - +0.6 781,661 - +0.8 781,684 - +0.2 781,684 - +0.5 781,692 + -1.7 781,732 + +0.1 781,732 + +0.5 781,733 - +0.0 781,747 + AO353_03665 0.12 -1.0 781,747 + AO353_03665 0.12 -0.1 781,747 + AO353_03665 0.12 +1.4 781,747 + AO353_03665 0.12 -1.2 781,747 + -0.2 781,747 + AO353_03665 0.12 -3.1 781,747 + AO353_03665 0.12 -0.9 781,747 + AO353_03665 0.12 +0.2 781,747 + AO353_03665 0.12 +1.1 781,747 + AO353_03665 0.12 +0.7 781,747 + AO353_03665 0.12 -0.1 781,748 - AO353_03665 0.12 -0.6 781,748 - AO353_03665 0.12 -1.2 781,748 - AO353_03665 0.12 +0.4 781,748 - AO353_03665 0.12 -0.6 781,748 - AO353_03665 0.12 -2.7 781,748 - AO353_03665 0.12 -2.1 781,748 - AO353_03665 0.12 -1.5 781,748 - AO353_03665 0.12 +0.3 781,758 + AO353_03665 0.13 -0.7 781,759 - AO353_03665 0.13 +1.0 781,759 - AO353_03665 0.13 +0.9 781,780 + AO353_03665 0.17 -0.3 781,780 + AO353_03665 0.17 -1.4 781,780 + AO353_03665 0.17 +0.2 781,781 - AO353_03665 0.17 -0.5 781,781 - AO353_03665 0.17 -1.6 781,781 - AO353_03665 0.17 -1.0 781,781 - AO353_03665 0.17 -0.0 781,781 - AO353_03665 0.17 +0.7 781,781 - AO353_03665 0.17 -0.6 781,784 + AO353_03665 0.17 +0.5 781,784 + AO353_03665 0.17 +0.3 781,784 + AO353_03665 0.17 -0.7 781,784 + AO353_03665 0.17 -2.2 781,784 + AO353_03665 0.17 -1.5 781,784 + AO353_03665 0.17 -0.2 781,784 + AO353_03665 0.17 +0.2 781,784 + AO353_03665 0.17 -0.0 781,785 - AO353_03665 0.18 -0.5 781,785 - AO353_03665 0.18 -1.4 781,785 - AO353_03665 0.18 +1.2 781,785 - AO353_03665 0.18 +1.2 781,785 - AO353_03665 0.18 +0.2 781,785 - AO353_03665 0.18 +0.6 781,785 - AO353_03665 0.18 -0.4 781,785 - AO353_03665 0.18 -0.8 781,800 + AO353_03665 0.20 -0.5 781,800 + AO353_03665 0.20 -0.0 781,800 + AO353_03665 0.20 -1.3 781,800 + AO353_03665 0.20 +0.7 781,801 - AO353_03665 0.20 +0.0 781,801 - AO353_03665 0.20 -0.6 781,801 - AO353_03665 0.20 -0.1 781,801 - AO353_03665 0.20 -0.5 781,801 - AO353_03665 0.20 +0.8 781,801 - AO353_03665 0.20 +0.5 781,801 - AO353_03665 0.20 +1.4 781,801 - AO353_03665 0.20 +0.3 781,830 + AO353_03665 0.25 -0.1 781,831 - AO353_03665 0.25 -1.0 781,831 - AO353_03665 0.25 +0.6 781,976 + AO353_03665 0.48 +3.4 781,977 - AO353_03665 0.48 +0.2 781,977 - AO353_03665 0.48 +0.2 782,087 - AO353_03665 0.65 +1.2 782,087 - AO353_03665 0.65 -0.4 782,218 + AO353_03665 0.86 -1.4 782,218 + AO353_03665 0.86 -0.4 782,218 + AO353_03665 0.86 -0.0 782,218 + AO353_03665 0.86 +0.8 782,219 - AO353_03665 0.86 -1.9 782,219 - AO353_03665 0.86 -0.4 782,272 + -0.1 782,272 + -2.1 782,272 + +0.5 782,272 + -0.2 782,273 - +1.0 782,273 - +0.3 782,299 + +0.3 782,299 + +0.3 782,299 + -0.6 782,299 + -1.7 782,299 + +0.5 782,299 + -2.2 782,300 - -0.2 782,300 - +0.2 782,300 - +1.3 782,300 - -0.1 782,300 - -0.8 782,376 - +0.4 782,404 + -1.4 782,404 + +1.8 782,404 + -0.5 782,404 + +0.7 782,404 + -0.5 782,404 + -1.3 782,404 + -0.2 782,404 + +1.0 782,404 + +0.4 782,404 + -0.2 782,405 - -0.6 782,405 - -1.2 782,405 - +0.3 782,434 + +0.6 782,434 + +2.0 782,434 + +1.9 782,434 + +0.6 782,434 + +0.5 782,435 - +0.9 782,435 - +3.0 782,435 - +0.4 782,435 - +1.2 782,435 - +2.4 782,523 + +1.7 782,524 - +1.2 782,548 + AO353_03670 0.12 +1.8 782,548 + AO353_03670 0.12 +3.3 782,548 + AO353_03670 0.12 +1.2 782,548 + AO353_03670 0.12 +1.8 782,549 - AO353_03670 0.12 +2.5 782,549 - AO353_03670 0.12 +1.1 782,549 - AO353_03670 0.12 +0.9 782,549 - AO353_03670 0.12 +1.5 782,549 - AO353_03670 0.12 +0.0
Or see this region's nucleotide sequence