Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01780 and AO353_01785 are separated by 89 nucleotides AO353_01785 and AO353_01790 overlap by 4 nucleotides AO353_01790 and AO353_01795 are separated by 160 nucleotides AO353_01795 and AO353_01800 are separated by 66 nucleotides
AO353_01780: AO353_01780 - heat-shock protein Hsp90, at 373,832 to 375,736
_01780
AO353_01785: AO353_01785 - thioesterase, at 375,826 to 376,278
_01785
AO353_01790: AO353_01790 - thioesterase, at 376,275 to 376,751
_01790
AO353_01795: AO353_01795 - hypothetical protein, at 376,912 to 377,151
_01795
AO353_01800: AO353_01800 - hypothetical protein, at 377,218 to 377,619
_01800
Position (kb) 375
376
377 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 374.853 kb on + strand, within AO353_01780 at 374.883 kb on + strand, within AO353_01780 at 374.883 kb on + strand, within AO353_01780 at 374.883 kb on + strand, within AO353_01780 at 374.898 kb on + strand, within AO353_01780 at 374.899 kb on - strand, within AO353_01780 at 374.899 kb on - strand, within AO353_01780 at 374.970 kb on + strand, within AO353_01780 at 374.971 kb on - strand, within AO353_01780 at 375.129 kb on + strand, within AO353_01780 at 375.129 kb on + strand, within AO353_01780 at 375.129 kb on + strand, within AO353_01780 at 375.130 kb on - strand, within AO353_01780 at 375.209 kb on - strand, within AO353_01780 at 375.209 kb on - strand, within AO353_01780 at 375.309 kb on + strand, within AO353_01780 at 375.309 kb on + strand, within AO353_01780 at 375.309 kb on + strand at 375.309 kb on + strand, within AO353_01780 at 375.309 kb on + strand, within AO353_01780 at 375.310 kb on - strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.311 kb on + strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.312 kb on - strand, within AO353_01780 at 375.346 kb on - strand, within AO353_01780 at 375.590 kb on + strand at 375.590 kb on + strand at 375.591 kb on - strand at 375.591 kb on - strand at 375.654 kb on + strand at 375.655 kb on - strand at 375.813 kb on + strand at 375.813 kb on + strand at 375.814 kb on - strand at 375.960 kb on - strand, within AO353_01785 at 375.960 kb on - strand, within AO353_01785 at 375.960 kb on - strand, within AO353_01785 at 375.960 kb on - strand, within AO353_01785 at 375.989 kb on + strand, within AO353_01785 at 375.989 kb on + strand, within AO353_01785 at 375.990 kb on - strand, within AO353_01785 at 375.990 kb on - strand, within AO353_01785 at 376.081 kb on + strand at 376.122 kb on + strand, within AO353_01785 at 376.122 kb on + strand, within AO353_01785 at 376.122 kb on + strand, within AO353_01785 at 376.122 kb on + strand, within AO353_01785 at 376.122 kb on + strand, within AO353_01785 at 376.123 kb on - strand, within AO353_01785 at 376.123 kb on - strand, within AO353_01785 at 376.227 kb on - strand, within AO353_01785 at 376.269 kb on + strand at 376.269 kb on + strand at 376.483 kb on + strand, within AO353_01790 at 376.483 kb on + strand, within AO353_01790 at 376.483 kb on + strand, within AO353_01790 at 376.483 kb on + strand, within AO353_01790 at 376.483 kb on + strand, within AO353_01790 at 376.483 kb on + strand, within AO353_01790 at 376.484 kb on - strand, within AO353_01790 at 376.484 kb on - strand, within AO353_01790 at 376.484 kb on - strand, within AO353_01790 at 376.484 kb on - strand, within AO353_01790 at 376.484 kb on - strand, within AO353_01790 at 376.575 kb on - strand, within AO353_01790 at 376.575 kb on - strand, within AO353_01790 at 376.575 kb on - strand, within AO353_01790 at 376.575 kb on - strand, within AO353_01790 at 376.631 kb on - strand, within AO353_01790 at 376.658 kb on + strand, within AO353_01790 at 376.658 kb on + strand, within AO353_01790 at 376.658 kb on + strand, within AO353_01790 at 376.658 kb on + strand, within AO353_01790 at 376.659 kb on - strand, within AO353_01790 at 376.659 kb on - strand, within AO353_01790 at 376.659 kb on - strand, within AO353_01790 at 376.659 kb on - strand, within AO353_01790 at 376.659 kb on - strand, within AO353_01790 at 376.677 kb on + strand, within AO353_01790 at 376.678 kb on - strand, within AO353_01790 at 376.769 kb on + strand at 376.770 kb on - strand at 376.770 kb on - strand at 376.791 kb on - strand at 376.816 kb on - strand at 376.819 kb on + strand at 376.820 kb on - strand at 376.826 kb on + strand at 376.826 kb on + strand at 376.828 kb on + strand at 376.828 kb on + strand at 376.828 kb on + strand at 376.828 kb on + strand at 376.828 kb on + strand at 376.828 kb on + strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.829 kb on - strand at 376.830 kb on + strand at 376.830 kb on + strand at 376.830 kb on + strand at 376.831 kb on - strand at 376.831 kb on - strand at 376.831 kb on - strand at 376.836 kb on + strand at 376.852 kb on + strand at 376.852 kb on + strand at 376.853 kb on - strand at 376.883 kb on + strand at 376.883 kb on + strand at 376.883 kb on + strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.884 kb on - strand at 376.887 kb on + strand at 376.887 kb on + strand at 376.917 kb on + strand at 376.918 kb on - strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.925 kb on + strand at 376.926 kb on - strand at 376.926 kb on - strand at 376.926 kb on - strand at 376.926 kb on - strand at 376.929 kb on + strand at 376.930 kb on - strand at 377.052 kb on + strand, within AO353_01795 at 377.052 kb on + strand, within AO353_01795 at 377.102 kb on + strand, within AO353_01795 at 377.103 kb on - strand, within AO353_01795 at 377.121 kb on + strand, within AO353_01795 at 377.121 kb on + strand, within AO353_01795 at 377.121 kb on + strand, within AO353_01795 at 377.140 kb on - strand at 377.149 kb on + strand at 377.149 kb on + strand at 377.150 kb on - strand at 377.170 kb on + strand at 377.170 kb on + strand at 377.170 kb on + strand at 377.171 kb on - strand at 377.171 kb on - strand at 377.171 kb on - strand at 377.174 kb on - strand at 377.196 kb on + strand at 377.197 kb on - strand at 377.211 kb on + strand at 377.247 kb on + strand at 377.248 kb on - strand at 377.248 kb on - strand at 377.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 374,853 + AO353_01780 0.54 -0.4 374,883 + AO353_01780 0.55 -0.1 374,883 + AO353_01780 0.55 +0.4 374,883 + AO353_01780 0.55 +1.0 374,898 + AO353_01780 0.56 -1.9 374,899 - AO353_01780 0.56 -1.1 374,899 - AO353_01780 0.56 -1.6 374,970 + AO353_01780 0.60 +0.2 374,971 - AO353_01780 0.60 -0.9 375,129 + AO353_01780 0.68 +1.2 375,129 + AO353_01780 0.68 -2.2 375,129 + AO353_01780 0.68 -0.6 375,130 - AO353_01780 0.68 +0.0 375,209 - AO353_01780 0.72 -0.6 375,209 - AO353_01780 0.72 -1.2 375,309 + AO353_01780 0.78 +0.2 375,309 + AO353_01780 0.78 -1.3 375,309 + +0.8 375,309 + AO353_01780 0.78 -0.7 375,309 + AO353_01780 0.78 -0.6 375,310 - AO353_01780 0.78 -0.1 375,311 + AO353_01780 0.78 -1.5 375,311 + AO353_01780 0.78 -0.1 375,311 + AO353_01780 0.78 +0.4 375,311 + AO353_01780 0.78 -0.6 375,311 + AO353_01780 0.78 -2.6 375,311 + AO353_01780 0.78 -0.1 375,311 + AO353_01780 0.78 -0.2 375,311 + AO353_01780 0.78 -0.6 375,312 - AO353_01780 0.78 +1.3 375,312 - AO353_01780 0.78 -0.6 375,312 - AO353_01780 0.78 -1.2 375,312 - AO353_01780 0.78 -0.7 375,312 - AO353_01780 0.78 +0.2 375,312 - AO353_01780 0.78 -1.6 375,312 - AO353_01780 0.78 -2.2 375,312 - AO353_01780 0.78 +0.9 375,312 - AO353_01780 0.78 +1.0 375,312 - AO353_01780 0.78 -0.4 375,346 - AO353_01780 0.79 -2.1 375,590 + -0.8 375,590 + -0.7 375,591 - -0.4 375,591 - -0.1 375,654 + -0.2 375,655 - +0.4 375,813 + -0.1 375,813 + -0.8 375,814 - +2.2 375,960 - AO353_01785 0.30 +0.2 375,960 - AO353_01785 0.30 -1.2 375,960 - AO353_01785 0.30 -0.6 375,960 - AO353_01785 0.30 -1.7 375,989 + AO353_01785 0.36 -1.1 375,989 + AO353_01785 0.36 -1.6 375,990 - AO353_01785 0.36 -0.9 375,990 - AO353_01785 0.36 -1.6 376,081 + +1.0 376,122 + AO353_01785 0.65 -1.6 376,122 + AO353_01785 0.65 +0.2 376,122 + AO353_01785 0.65 -0.2 376,122 + AO353_01785 0.65 -1.7 376,122 + AO353_01785 0.65 -0.6 376,123 - AO353_01785 0.66 +0.4 376,123 - AO353_01785 0.66 -0.7 376,227 - AO353_01785 0.89 +1.2 376,269 + +0.4 376,269 + +0.9 376,483 + AO353_01790 0.44 -0.6 376,483 + AO353_01790 0.44 -3.1 376,483 + AO353_01790 0.44 -1.6 376,483 + AO353_01790 0.44 -0.3 376,483 + AO353_01790 0.44 +0.2 376,483 + AO353_01790 0.44 -0.3 376,484 - AO353_01790 0.44 +0.3 376,484 - AO353_01790 0.44 +0.4 376,484 - AO353_01790 0.44 -0.4 376,484 - AO353_01790 0.44 -1.0 376,484 - AO353_01790 0.44 -1.2 376,575 - AO353_01790 0.63 -0.4 376,575 - AO353_01790 0.63 -0.6 376,575 - AO353_01790 0.63 +0.3 376,575 - AO353_01790 0.63 -1.4 376,631 - AO353_01790 0.75 +0.1 376,658 + AO353_01790 0.80 +0.6 376,658 + AO353_01790 0.80 -0.2 376,658 + AO353_01790 0.80 +0.8 376,658 + AO353_01790 0.80 -2.1 376,659 - AO353_01790 0.81 +0.1 376,659 - AO353_01790 0.81 +0.5 376,659 - AO353_01790 0.81 +0.3 376,659 - AO353_01790 0.81 +1.2 376,659 - AO353_01790 0.81 +0.8 376,677 + AO353_01790 0.84 -1.2 376,678 - AO353_01790 0.84 -0.6 376,769 + +0.2 376,770 - -1.1 376,770 - +0.5 376,791 - -0.7 376,816 - +0.2 376,819 + -0.6 376,820 - +1.0 376,826 + +0.6 376,826 + -1.1 376,828 + -0.6 376,828 + -0.8 376,828 + +0.3 376,828 + -1.4 376,828 + -0.2 376,828 + +0.3 376,829 - -0.8 376,829 - -1.7 376,829 - -0.6 376,829 - +0.2 376,829 - -0.3 376,829 - -0.5 376,829 - -0.2 376,830 + -0.1 376,830 + +0.3 376,830 + +0.1 376,831 - -0.3 376,831 - -0.7 376,831 - -0.3 376,836 + +0.4 376,852 + -0.1 376,852 + +0.5 376,853 - +2.2 376,883 + +1.5 376,883 + +0.0 376,883 + +0.8 376,884 - -2.2 376,884 - +0.8 376,884 - -0.3 376,884 - -0.8 376,884 - +1.8 376,884 - +1.8 376,884 - -0.2 376,887 + +1.8 376,887 + -0.2 376,917 + +0.6 376,918 - +0.4 376,925 + -0.3 376,925 + +0.8 376,925 + +1.1 376,925 + -0.6 376,925 + -0.6 376,925 + -0.5 376,925 + -0.2 376,925 + +0.3 376,926 - -1.2 376,926 - -1.6 376,926 - -0.2 376,926 - -0.9 376,929 + -0.2 376,930 - -0.5 377,052 + AO353_01795 0.58 -0.1 377,052 + AO353_01795 0.58 +0.2 377,102 + AO353_01795 0.79 -0.4 377,103 - AO353_01795 0.80 -0.8 377,121 + AO353_01795 0.87 -0.8 377,121 + AO353_01795 0.87 +1.4 377,121 + AO353_01795 0.87 -0.8 377,140 - -0.6 377,149 + +0.4 377,149 + -0.4 377,150 - -1.4 377,170 + -0.2 377,170 + -0.2 377,170 + +0.3 377,171 - -0.4 377,171 - +0.2 377,171 - -0.2 377,174 - -0.2 377,196 + +0.4 377,197 - -0.8 377,211 + +0.6 377,247 + -2.0 377,248 - -1.9 377,248 - -1.4 377,248 - -1.2
Or see this region's nucleotide sequence