Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01420 and AO353_01425 overlap by 4 nucleotides AO353_01425 and AO353_01430 are separated by 136 nucleotides AO353_01430 and AO353_01435 overlap by 4 nucleotides AO353_01435 and AO353_01440 overlap by 1 nucleotides
AO353_01420: AO353_01420 - acylaldehyde oxidase, at 305,686 to 308,001
_01420
AO353_01425: AO353_01425 - (2Fe-2S)-binding protein, at 307,998 to 308,468
_01425
AO353_01430: AO353_01430 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 308,605 to 309,624
_01430
AO353_01435: AO353_01435 - protein tyrosine phosphatase, at 309,621 to 310,085
_01435
AO353_01440: AO353_01440 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 310,085 to 310,849
_01440
Position (kb) 308
309
310 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 307.614 kb on - strand, within AO353_01420 at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.817 kb on + strand at 307.818 kb on - strand at 307.818 kb on - strand at 307.818 kb on - strand at 307.968 kb on + strand at 307.968 kb on + strand at 307.969 kb on - strand at 307.969 kb on - strand at 307.969 kb on - strand at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.059 kb on + strand, within AO353_01425 at 308.060 kb on - strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.078 kb on + strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.079 kb on - strand, within AO353_01425 at 308.322 kb on - strand, within AO353_01425 at 308.462 kb on + strand at 308.462 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.482 kb on + strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.483 kb on - strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.484 kb on + strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.485 kb on - strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.488 kb on + strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.489 kb on - strand at 308.494 kb on + strand at 308.494 kb on + strand at 308.494 kb on + strand at 308.526 kb on - strand at 308.526 kb on - strand at 308.526 kb on - strand at 308.530 kb on + strand at 308.530 kb on + strand at 308.530 kb on + strand at 308.601 kb on + strand at 308.602 kb on - strand at 308.602 kb on - strand at 308.610 kb on - strand at 308.610 kb on - strand at 309.625 kb on - strand at 309.710 kb on - strand, within AO353_01435 at 309.710 kb on - strand, within AO353_01435 at 309.710 kb on - strand, within AO353_01435 at 309.710 kb on - strand, within AO353_01435 at 309.713 kb on - strand, within AO353_01435 at 309.713 kb on - strand, within AO353_01435 at 309.746 kb on - strand, within AO353_01435 at 309.845 kb on - strand, within AO353_01435 at 309.845 kb on - strand, within AO353_01435 at 309.899 kb on - strand, within AO353_01435
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 307,614 - AO353_01420 0.83 -0.5 307,817 + -0.6 307,817 + -1.9 307,817 + -1.3 307,817 + +0.4 307,817 + +1.9 307,818 - -0.3 307,818 - +0.3 307,818 - -1.7 307,968 + -0.2 307,968 + -0.4 307,969 - -0.9 307,969 - -3.0 307,969 - +0.3 308,059 + AO353_01425 0.13 -1.1 308,059 + AO353_01425 0.13 +0.5 308,059 + AO353_01425 0.13 +0.1 308,059 + AO353_01425 0.13 -0.1 308,059 + AO353_01425 0.13 -0.7 308,060 - AO353_01425 0.13 -0.6 308,078 + AO353_01425 0.17 -0.9 308,078 + AO353_01425 0.17 +0.3 308,078 + AO353_01425 0.17 +0.4 308,078 + AO353_01425 0.17 +0.7 308,078 + AO353_01425 0.17 -2.7 308,078 + AO353_01425 0.17 -0.3 308,078 + AO353_01425 0.17 -0.3 308,079 - AO353_01425 0.17 -2.3 308,079 - AO353_01425 0.17 -2.8 308,079 - AO353_01425 0.17 +0.5 308,079 - AO353_01425 0.17 +0.9 308,079 - AO353_01425 0.17 -1.7 308,322 - AO353_01425 0.69 +0.7 308,462 + +2.0 308,462 + -0.6 308,482 + +0.1 308,482 + -0.9 308,482 + -0.3 308,482 + -0.6 308,483 - -0.9 308,483 - +0.5 308,483 - +0.1 308,483 - -0.5 308,484 + +0.1 308,484 + -1.7 308,484 + -0.1 308,484 + -1.3 308,484 + -1.4 308,484 + -0.6 308,484 + -2.3 308,484 + -0.3 308,484 + -0.0 308,484 + -1.9 308,484 + +0.2 308,484 + +0.3 308,484 + +0.5 308,484 + +0.1 308,484 + +0.1 308,484 + +0.1 308,484 + +0.3 308,484 + +2.4 308,484 + -1.4 308,484 + -0.4 308,484 + +1.0 308,484 + -0.3 308,484 + +1.1 308,484 + -0.4 308,484 + +0.7 308,485 - -0.3 308,485 - +0.6 308,485 - -0.2 308,485 - +0.1 308,485 - -0.1 308,485 - -0.2 308,485 - +0.4 308,485 - -0.7 308,485 - -0.6 308,485 - +0.1 308,485 - -0.3 308,485 - -0.6 308,485 - -0.0 308,485 - +1.1 308,488 + +0.7 308,488 + +0.1 308,488 + +1.1 308,488 + -0.3 308,488 + +0.8 308,488 + -0.0 308,488 + +0.3 308,489 - +0.5 308,489 - +1.0 308,489 - -0.7 308,489 - +0.6 308,489 - +0.1 308,489 - +2.1 308,489 - -0.3 308,489 - -0.9 308,489 - +0.4 308,494 + +1.0 308,494 + -0.1 308,494 + +1.0 308,526 - -1.1 308,526 - -1.2 308,526 - +0.1 308,530 + -2.0 308,530 + -0.5 308,530 + +0.6 308,601 + -0.5 308,602 - +0.3 308,602 - +0.1 308,610 - -1.1 308,610 - +1.0 309,625 - -1.6 309,710 - AO353_01435 0.19 -1.1 309,710 - AO353_01435 0.19 +0.0 309,710 - AO353_01435 0.19 +0.1 309,710 - AO353_01435 0.19 +0.2 309,713 - AO353_01435 0.20 +0.1 309,713 - AO353_01435 0.20 +0.1 309,746 - AO353_01435 0.27 +0.0 309,845 - AO353_01435 0.48 +1.2 309,845 - AO353_01435 0.48 -2.0 309,899 - AO353_01435 0.60 -0.3
Or see this region's nucleotide sequence