Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00345 and AO353_00350 are separated by 61 nucleotides AO353_00350 and AO353_00355 are separated by 155 nucleotides AO353_00355 and AO353_00360 overlap by 1 nucleotides
AO353_00345: AO353_00345 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 62,596 to 63,426
_00345
AO353_00350: AO353_00350 - copper-binding protein, at 63,488 to 64,045
_00350
AO353_00355: AO353_00355 - transcriptional regulator, at 64,201 to 64,881
_00355
AO353_00360: AO353_00360 - ATPase, at 64,881 to 66,242
_00360
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 62.494 kb on - strand at 62.494 kb on - strand at 62.514 kb on + strand at 62.514 kb on + strand at 62.515 kb on - strand at 62.569 kb on + strand at 62.569 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.591 kb on + strand at 62.592 kb on - strand at 62.592 kb on - strand at 62.592 kb on - strand at 62.597 kb on + strand at 62.681 kb on + strand, within AO353_00345 at 62.690 kb on + strand, within AO353_00345 at 62.690 kb on + strand, within AO353_00345 at 62.690 kb on + strand, within AO353_00345 at 62.690 kb on + strand, within AO353_00345 at 62.691 kb on - strand, within AO353_00345 at 62.691 kb on - strand, within AO353_00345 at 62.691 kb on - strand, within AO353_00345 at 62.746 kb on + strand, within AO353_00345 at 62.746 kb on + strand, within AO353_00345 at 62.793 kb on - strand, within AO353_00345 at 62.793 kb on - strand, within AO353_00345 at 62.963 kb on + strand, within AO353_00345 at 62.963 kb on + strand, within AO353_00345 at 62.963 kb on + strand, within AO353_00345 at 62.963 kb on + strand, within AO353_00345 at 63.013 kb on + strand, within AO353_00345 at 63.013 kb on + strand, within AO353_00345 at 63.013 kb on + strand, within AO353_00345 at 63.014 kb on - strand, within AO353_00345 at 63.014 kb on - strand, within AO353_00345 at 63.051 kb on + strand, within AO353_00345 at 63.155 kb on + strand, within AO353_00345 at 63.291 kb on - strand, within AO353_00345 at 63.291 kb on - strand, within AO353_00345 at 63.291 kb on - strand, within AO353_00345 at 63.291 kb on - strand, within AO353_00345 at 63.368 kb on + strand at 63.368 kb on + strand at 63.368 kb on + strand at 63.369 kb on - strand at 63.369 kb on - strand at 63.369 kb on - strand at 63.380 kb on + strand at 63.380 kb on + strand at 63.381 kb on - strand at 63.381 kb on - strand at 63.381 kb on - strand at 63.460 kb on - strand at 63.460 kb on - strand at 63.489 kb on + strand at 63.490 kb on - strand at 63.490 kb on - strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.517 kb on + strand at 63.518 kb on - strand at 63.518 kb on - strand at 63.518 kb on - strand at 63.529 kb on - strand at 63.542 kb on - strand at 63.542 kb on - strand at 63.542 kb on - strand at 63.822 kb on - strand, within AO353_00350 at 63.822 kb on - strand, within AO353_00350 at 63.832 kb on + strand, within AO353_00350 at 63.833 kb on - strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 64.022 kb on + strand at 64.023 kb on - strand at 64.088 kb on + strand at 64.088 kb on + strand at 64.089 kb on - strand at 64.089 kb on - strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.092 kb on - strand at 64.092 kb on - strand at 64.125 kb on + strand at 64.125 kb on + strand at 64.126 kb on - strand at 64.126 kb on - strand at 64.126 kb on - strand at 64.136 kb on - strand at 64.136 kb on - strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.167 kb on - strand at 64.167 kb on - strand at 64.168 kb on + strand at 64.197 kb on - strand at 64.243 kb on + strand at 64.243 kb on + strand at 64.243 kb on + strand at 64.244 kb on - strand at 64.244 kb on - strand at 64.244 kb on - strand at 64.333 kb on + strand, within AO353_00355 at 64.334 kb on - strand, within AO353_00355 at 64.493 kb on - strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.548 kb on - strand, within AO353_00355 at 64.836 kb on + strand at 64.841 kb on + strand at 64.842 kb on - strand at 64.856 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 62,494 - -1.3 62,494 - -0.6 62,514 + -1.1 62,514 + -0.3 62,515 - +0.1 62,569 + +0.3 62,569 + +0.1 62,591 + -0.8 62,591 + -1.1 62,591 + -0.2 62,591 + -0.2 62,591 + +0.2 62,591 + +1.8 62,591 + -0.1 62,591 + +0.7 62,591 + +3.3 62,591 + -1.3 62,591 + -0.9 62,591 + -0.3 62,591 + -0.6 62,592 - -0.5 62,592 - -1.0 62,592 - +1.1 62,597 + -1.0 62,681 + AO353_00345 0.10 +1.3 62,690 + AO353_00345 0.11 +0.6 62,690 + AO353_00345 0.11 +0.5 62,690 + AO353_00345 0.11 +0.7 62,690 + AO353_00345 0.11 +1.7 62,691 - AO353_00345 0.11 -0.6 62,691 - AO353_00345 0.11 -2.1 62,691 - AO353_00345 0.11 +2.1 62,746 + AO353_00345 0.18 -0.3 62,746 + AO353_00345 0.18 +1.7 62,793 - AO353_00345 0.24 -2.0 62,793 - AO353_00345 0.24 +1.0 62,963 + AO353_00345 0.44 -0.4 62,963 + AO353_00345 0.44 +0.1 62,963 + AO353_00345 0.44 -0.2 62,963 + AO353_00345 0.44 +0.2 63,013 + AO353_00345 0.50 -0.8 63,013 + AO353_00345 0.50 +1.9 63,013 + AO353_00345 0.50 +0.7 63,014 - AO353_00345 0.50 +0.2 63,014 - AO353_00345 0.50 -1.3 63,051 + AO353_00345 0.55 -1.0 63,155 + AO353_00345 0.67 +2.7 63,291 - AO353_00345 0.84 +0.7 63,291 - AO353_00345 0.84 -1.3 63,291 - AO353_00345 0.84 +0.1 63,291 - AO353_00345 0.84 +0.9 63,368 + +0.7 63,368 + +0.7 63,368 + +0.4 63,369 - -0.1 63,369 - +1.0 63,369 - +1.6 63,380 + -0.5 63,380 + -1.3 63,381 - -0.0 63,381 - +0.5 63,381 - +0.7 63,460 - +0.4 63,460 - -1.6 63,489 + -2.1 63,490 - -1.8 63,490 - -0.3 63,517 + -1.0 63,517 + +0.1 63,517 + +2.4 63,517 + +1.3 63,517 + +0.0 63,517 + -1.0 63,517 + -1.3 63,518 - -0.1 63,518 - +0.5 63,518 - -1.5 63,529 - +0.7 63,542 - -1.3 63,542 - -0.1 63,542 - -0.2 63,822 - AO353_00350 0.60 +1.2 63,822 - AO353_00350 0.60 -1.0 63,832 + AO353_00350 0.62 +0.1 63,833 - AO353_00350 0.62 +0.6 63,898 + AO353_00350 0.73 -0.6 63,898 + AO353_00350 0.73 -0.1 63,898 + AO353_00350 0.73 -1.1 63,898 + AO353_00350 0.73 +1.7 63,898 + AO353_00350 0.73 +1.1 63,899 - AO353_00350 0.74 +0.7 63,899 - AO353_00350 0.74 -0.4 63,899 - AO353_00350 0.74 +0.5 63,899 - AO353_00350 0.74 +1.3 63,899 - AO353_00350 0.74 +0.4 63,899 - AO353_00350 0.74 +1.3 63,963 + AO353_00350 0.85 +0.5 63,963 + AO353_00350 0.85 -0.6 63,963 + AO353_00350 0.85 -1.1 63,963 + AO353_00350 0.85 -1.3 63,963 + AO353_00350 0.85 +0.3 63,964 - AO353_00350 0.85 +0.2 63,964 - AO353_00350 0.85 -0.3 63,964 - AO353_00350 0.85 +0.4 64,022 + +0.4 64,023 - +1.3 64,088 + +0.4 64,088 + +0.7 64,089 - -0.0 64,089 - -0.3 64,091 + +0.5 64,091 + -0.5 64,091 + +0.2 64,091 + -0.5 64,091 + +0.3 64,091 + -0.9 64,092 - -0.1 64,092 - +0.4 64,125 + -0.2 64,125 + -0.9 64,126 - +0.3 64,126 - +0.5 64,126 - -0.6 64,136 - -0.2 64,136 - -1.9 64,166 + -0.0 64,166 + -0.4 64,166 + +0.6 64,166 + -0.6 64,167 - -1.3 64,167 - +0.7 64,168 + -0.4 64,197 - +1.7 64,243 + +2.0 64,243 + +0.4 64,243 + -1.8 64,244 - -0.9 64,244 - -0.3 64,244 - +0.1 64,333 + AO353_00355 0.19 +0.5 64,334 - AO353_00355 0.20 +0.3 64,493 - AO353_00355 0.43 -1.5 64,547 + AO353_00355 0.51 +0.2 64,547 + AO353_00355 0.51 -1.3 64,547 + AO353_00355 0.51 +0.1 64,548 - AO353_00355 0.51 -2.1 64,836 + +2.0 64,841 + -0.5 64,842 - -0.9 64,856 - -0.7
Or see this region's nucleotide sequence