Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18875 and ABZR86_RS18880 are separated by 87 nucleotides ABZR86_RS18880 and ABZR86_RS18885 are separated by 527 nucleotides
ABZR86_RS18875: ABZR86_RS18875 - glycine cleavage system aminomethyltransferase GcvT, at 205,675 to 206,775
_RS18875
ABZR86_RS18880: ABZR86_RS18880 - glycine cleavage system protein GcvH, at 206,863 to 207,258
_RS18880
ABZR86_RS18885: ABZR86_RS18885 - met regulon transcriptional regulator MetJ, at 207,786 to 208,340
_RS18885
Position (kb) 206
207
208 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 205.927 kb on + strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.928 kb on - strand, within ABZR86_RS18875 at 205.979 kb on - strand, within ABZR86_RS18875 at 205.979 kb on - strand, within ABZR86_RS18875 at 206.254 kb on + strand, within ABZR86_RS18875 at 206.255 kb on - strand, within ABZR86_RS18875 at 206.735 kb on - strand at 206.806 kb on + strand at 206.806 kb on + strand at 206.806 kb on + strand at 206.807 kb on - strand at 206.807 kb on - strand at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.986 kb on + strand, within ABZR86_RS18880 at 206.987 kb on - strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.073 kb on + strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.074 kb on - strand, within ABZR86_RS18880 at 207.559 kb on - strand at 207.613 kb on - strand at 207.752 kb on + strand at 207.768 kb on + strand at 207.813 kb on + strand at 207.813 kb on + strand at 207.814 kb on - strand at 207.863 kb on + strand, within ABZR86_RS18885 at 207.864 kb on - strand, within ABZR86_RS18885 at 207.864 kb on - strand, within ABZR86_RS18885 at 207.880 kb on + strand, within ABZR86_RS18885 at 207.903 kb on - strand, within ABZR86_RS18885 at 207.978 kb on - strand, within ABZR86_RS18885 at 208.019 kb on + strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885 at 208.020 kb on - strand, within ABZR86_RS18885
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 205,927 + ABZR86_RS18875 0.23 -1.1 205,928 - ABZR86_RS18875 0.23 +0.7 205,928 - ABZR86_RS18875 0.23 +0.2 205,928 - ABZR86_RS18875 0.23 +0.0 205,979 - ABZR86_RS18875 0.28 +0.5 205,979 - ABZR86_RS18875 0.28 -0.1 206,254 + ABZR86_RS18875 0.53 +0.8 206,255 - ABZR86_RS18875 0.53 +0.4 206,735 - +2.4 206,806 + +1.0 206,806 + +0.1 206,806 + -1.1 206,807 - +0.6 206,807 - +0.3 206,986 + ABZR86_RS18880 0.31 +1.6 206,986 + ABZR86_RS18880 0.31 -2.4 206,986 + ABZR86_RS18880 0.31 -0.6 206,986 + ABZR86_RS18880 0.31 +1.5 206,986 + ABZR86_RS18880 0.31 -0.9 206,986 + ABZR86_RS18880 0.31 -1.1 206,986 + ABZR86_RS18880 0.31 -1.1 206,986 + ABZR86_RS18880 0.31 -1.3 206,986 + ABZR86_RS18880 0.31 -2.5 206,986 + ABZR86_RS18880 0.31 +0.4 206,986 + ABZR86_RS18880 0.31 -0.7 206,986 + ABZR86_RS18880 0.31 +0.1 206,986 + ABZR86_RS18880 0.31 +0.5 206,986 + ABZR86_RS18880 0.31 -0.6 206,987 - ABZR86_RS18880 0.31 -1.0 207,073 + ABZR86_RS18880 0.53 -1.7 207,073 + ABZR86_RS18880 0.53 -2.0 207,074 - ABZR86_RS18880 0.53 -0.3 207,074 - ABZR86_RS18880 0.53 +0.1 207,074 - ABZR86_RS18880 0.53 +0.3 207,074 - ABZR86_RS18880 0.53 -0.8 207,074 - ABZR86_RS18880 0.53 +0.1 207,559 - -3.5 207,613 - +0.8 207,752 + +1.1 207,768 + -1.8 207,813 + -0.8 207,813 + -3.6 207,814 - -1.8 207,863 + ABZR86_RS18885 0.14 +0.5 207,864 - ABZR86_RS18885 0.14 +0.7 207,864 - ABZR86_RS18885 0.14 -2.8 207,880 + ABZR86_RS18885 0.17 -1.7 207,903 - ABZR86_RS18885 0.21 -3.0 207,978 - ABZR86_RS18885 0.35 -2.9 208,019 + ABZR86_RS18885 0.42 +0.3 208,020 - ABZR86_RS18885 0.42 -0.5 208,020 - ABZR86_RS18885 0.42 -1.6 208,020 - ABZR86_RS18885 0.42 -0.4 208,020 - ABZR86_RS18885 0.42 -2.2
Or see this region's nucleotide sequence