Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS18865

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS18860 and ABZR86_RS18865 are separated by 206 nucleotidesABZR86_RS18865 and ABZR86_RS18870 overlap by 1 nucleotides ABZR86_RS18860: ABZR86_RS18860 - ABC transporter permease, at 201,400 to 202,545 _RS18860 ABZR86_RS18865: ABZR86_RS18865 - sulfate adenylyltransferase subunit CysD, at 202,752 to 203,669 _RS18865 ABZR86_RS18870: ABZR86_RS18870 - adenylyl-sulfate kinase, at 203,669 to 205,531 _RS18870 Position (kb) 202 203 204Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 201.927 kb on + strand, within ABZR86_RS18860at 201.928 kb on - strand, within ABZR86_RS18860at 201.928 kb on - strand, within ABZR86_RS18860at 201.929 kb on + strand, within ABZR86_RS18860at 201.929 kb on + strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 201.930 kb on - strand, within ABZR86_RS18860at 202.451 kb on + strandat 202.452 kb on - strandat 202.558 kb on + strandat 202.559 kb on - strandat 202.559 kb on - strandat 202.561 kb on - strandat 202.580 kb on - strandat 202.580 kb on - strandat 202.860 kb on + strand, within ABZR86_RS18865at 202.860 kb on + strand, within ABZR86_RS18865at 203.090 kb on + strand, within ABZR86_RS18865at 203.090 kb on + strand, within ABZR86_RS18865at 203.091 kb on - strand, within ABZR86_RS18865at 203.136 kb on + strand, within ABZR86_RS18865at 203.136 kb on + strand, within ABZR86_RS18865at 203.136 kb on + strand, within ABZR86_RS18865at 203.137 kb on - strand, within ABZR86_RS18865at 203.137 kb on - strand, within ABZR86_RS18865at 203.272 kb on - strand, within ABZR86_RS18865at 203.272 kb on - strand, within ABZR86_RS18865at 203.272 kb on - strand, within ABZR86_RS18865at 203.272 kb on - strand, within ABZR86_RS18865at 203.272 kb on - strand, within ABZR86_RS18865at 203.309 kb on - strand, within ABZR86_RS18865at 203.349 kb on + strand, within ABZR86_RS18865at 203.349 kb on + strand, within ABZR86_RS18865at 203.386 kb on - strand, within ABZR86_RS18865at 203.407 kb on + strand, within ABZR86_RS18865at 203.408 kb on - strand, within ABZR86_RS18865at 203.408 kb on - strand, within ABZR86_RS18865at 203.408 kb on - strand, within ABZR86_RS18865at 203.410 kb on + strand, within ABZR86_RS18865at 203.411 kb on - strand, within ABZR86_RS18865at 203.411 kb on - strand, within ABZR86_RS18865at 203.661 kb on + strandat 203.661 kb on + strandat 203.662 kb on - strandat 203.662 kb on - strandat 203.662 kb on - strandat 203.978 kb on + strand, within ABZR86_RS18870at 203.978 kb on + strand, within ABZR86_RS18870at 204.073 kb on + strand, within ABZR86_RS18870at 204.074 kb on - strand, within ABZR86_RS18870at 204.074 kb on - strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.077 kb on + strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.078 kb on - strand, within ABZR86_RS18870at 204.079 kb on + strand, within ABZR86_RS18870at 204.079 kb on + strand, within ABZR86_RS18870at 204.079 kb on + strand, within ABZR86_RS18870at 204.080 kb on - strand, within ABZR86_RS18870at 204.080 kb on - strand, within ABZR86_RS18870at 204.080 kb on - strand, within ABZR86_RS18870at 204.080 kb on - strand, within ABZR86_RS18870at 204.401 kb on + strand, within ABZR86_RS18870

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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201,927 + ABZR86_RS18860 0.46 +0.2
201,928 - ABZR86_RS18860 0.46 +1.1
201,928 - ABZR86_RS18860 0.46 -0.5
201,929 + ABZR86_RS18860 0.46 -0.4
201,929 + ABZR86_RS18860 0.46 +0.9
201,930 - ABZR86_RS18860 0.46 -2.0
201,930 - ABZR86_RS18860 0.46 -0.9
201,930 - ABZR86_RS18860 0.46 +0.4
201,930 - ABZR86_RS18860 0.46 +0.7
201,930 - ABZR86_RS18860 0.46 -3.3
201,930 - ABZR86_RS18860 0.46 +0.5
202,451 + +0.2
202,452 - -1.3
202,558 + +0.2
202,559 - +0.1
202,559 - -0.5
202,561 - +0.7
202,580 - +1.3
202,580 - +0.3
202,860 + ABZR86_RS18865 0.12 +0.6
202,860 + ABZR86_RS18865 0.12 -0.1
203,090 + ABZR86_RS18865 0.37 +0.4
203,090 + ABZR86_RS18865 0.37 +0.7
203,091 - ABZR86_RS18865 0.37 -1.5
203,136 + ABZR86_RS18865 0.42 +0.6
203,136 + ABZR86_RS18865 0.42 -0.2
203,136 + ABZR86_RS18865 0.42 -1.2
203,137 - ABZR86_RS18865 0.42 +0.2
203,137 - ABZR86_RS18865 0.42 -0.2
203,272 - ABZR86_RS18865 0.57 -0.4
203,272 - ABZR86_RS18865 0.57 +1.1
203,272 - ABZR86_RS18865 0.57 -0.1
203,272 - ABZR86_RS18865 0.57 -0.9
203,272 - ABZR86_RS18865 0.57 -4.1
203,309 - ABZR86_RS18865 0.61 -2.4
203,349 + ABZR86_RS18865 0.65 -0.8
203,349 + ABZR86_RS18865 0.65 +0.9
203,386 - ABZR86_RS18865 0.69 -0.0
203,407 + ABZR86_RS18865 0.71 +1.4
203,408 - ABZR86_RS18865 0.71 -1.4
203,408 - ABZR86_RS18865 0.71 -0.1
203,408 - ABZR86_RS18865 0.71 +0.2
203,410 + ABZR86_RS18865 0.72 +0.4
203,411 - ABZR86_RS18865 0.72 -2.4
203,411 - ABZR86_RS18865 0.72 -1.1
203,661 + +0.7
203,661 + -0.3
203,662 - -1.5
203,662 - -1.0
203,662 - -1.6
203,978 + ABZR86_RS18870 0.17 -1.2
203,978 + ABZR86_RS18870 0.17 -0.0
204,073 + ABZR86_RS18870 0.22 +0.3
204,074 - ABZR86_RS18870 0.22 -0.6
204,074 - ABZR86_RS18870 0.22 -2.0
204,077 + ABZR86_RS18870 0.22 -0.1
204,077 + ABZR86_RS18870 0.22 -2.8
204,077 + ABZR86_RS18870 0.22 -1.6
204,077 + ABZR86_RS18870 0.22 +0.4
204,077 + ABZR86_RS18870 0.22 +0.9
204,077 + ABZR86_RS18870 0.22 -0.5
204,077 + ABZR86_RS18870 0.22 -1.1
204,077 + ABZR86_RS18870 0.22 +0.4
204,077 + ABZR86_RS18870 0.22 -0.3
204,078 - ABZR86_RS18870 0.22 -0.7
204,078 - ABZR86_RS18870 0.22 -0.3
204,078 - ABZR86_RS18870 0.22 -0.5
204,078 - ABZR86_RS18870 0.22 -0.3
204,078 - ABZR86_RS18870 0.22 -2.1
204,078 - ABZR86_RS18870 0.22 -1.1
204,078 - ABZR86_RS18870 0.22 -0.5
204,079 + ABZR86_RS18870 0.22 +0.1
204,079 + ABZR86_RS18870 0.22 +0.5
204,079 + ABZR86_RS18870 0.22 -0.3
204,080 - ABZR86_RS18870 0.22 +1.2
204,080 - ABZR86_RS18870 0.22 +0.3
204,080 - ABZR86_RS18870 0.22 -0.9
204,080 - ABZR86_RS18870 0.22 +0.0
204,401 + ABZR86_RS18870 0.39 -0.4

Or see this region's nucleotide sequence