Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15565 and ABZR86_RS15570 are separated by 190 nucleotides ABZR86_RS15570 and ABZR86_RS15575 are separated by 63 nucleotides ABZR86_RS15575 and ABZR86_RS15580 are separated by 284 nucleotides
ABZR86_RS15565: ABZR86_RS15565 - hypothetical protein, at 3,503,083 to 3,504,129
_RS15565
ABZR86_RS15570: ABZR86_RS15570 - hypothetical protein, at 3,504,320 to 3,504,517
_RS15570
ABZR86_RS15575: ABZR86_RS15575 - polyamine aminopropyltransferase, at 3,504,581 to 3,505,432
_RS15575
ABZR86_RS15580: ABZR86_RS15580 - biosynthetic arginine decarboxylase, at 3,505,717 to 3,507,606
_RS15580
Position (kb)
3504
3505
3506 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.636 kb on + strand, within ABZR86_RS15565 at 3503.645 kb on + strand, within ABZR86_RS15565 at 3503.645 kb on + strand, within ABZR86_RS15565 at 3503.646 kb on - strand, within ABZR86_RS15565 at 3503.646 kb on - strand, within ABZR86_RS15565 at 3503.646 kb on - strand, within ABZR86_RS15565 at 3503.646 kb on - strand, within ABZR86_RS15565 at 3503.883 kb on + strand, within ABZR86_RS15565 at 3503.884 kb on - strand, within ABZR86_RS15565 at 3503.897 kb on + strand, within ABZR86_RS15565 at 3503.897 kb on + strand, within ABZR86_RS15565 at 3503.897 kb on + strand, within ABZR86_RS15565 at 3503.897 kb on + strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3503.898 kb on - strand, within ABZR86_RS15565 at 3504.069 kb on - strand at 3504.113 kb on + strand at 3504.113 kb on + strand at 3504.114 kb on - strand at 3504.114 kb on - strand at 3504.114 kb on - strand at 3504.114 kb on - strand at 3504.114 kb on - strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.164 kb on + strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.165 kb on - strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.168 kb on + strand at 3504.169 kb on - strand at 3504.169 kb on - strand at 3504.169 kb on - strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.178 kb on + strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.179 kb on - strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.232 kb on + strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.233 kb on - strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.317 kb on + strand at 3504.318 kb on - strand at 3504.318 kb on - strand at 3504.318 kb on - strand at 3504.318 kb on - strand at 3504.331 kb on - strand at 3504.331 kb on - strand at 3504.331 kb on - strand at 3504.331 kb on - strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.582 kb on + strand at 3504.583 kb on - strand at 3505.482 kb on + strand at 3505.482 kb on + strand at 3505.483 kb on - strand at 3505.483 kb on - strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,503,636 + ABZR86_RS15565 0.53 -2.6 3,503,636 + ABZR86_RS15565 0.53 +0.2 3,503,636 + ABZR86_RS15565 0.53 -0.8 3,503,636 + ABZR86_RS15565 0.53 -1.8 3,503,636 + ABZR86_RS15565 0.53 -1.2 3,503,636 + ABZR86_RS15565 0.53 -1.3 3,503,636 + ABZR86_RS15565 0.53 +0.2 3,503,636 + ABZR86_RS15565 0.53 -0.3 3,503,636 + ABZR86_RS15565 0.53 -0.2 3,503,645 + ABZR86_RS15565 0.54 -0.3 3,503,645 + ABZR86_RS15565 0.54 +0.2 3,503,646 - ABZR86_RS15565 0.54 +0.5 3,503,646 - ABZR86_RS15565 0.54 +0.9 3,503,646 - ABZR86_RS15565 0.54 -0.4 3,503,646 - ABZR86_RS15565 0.54 +1.4 3,503,883 + ABZR86_RS15565 0.76 -0.4 3,503,884 - ABZR86_RS15565 0.77 -1.9 3,503,897 + ABZR86_RS15565 0.78 -1.1 3,503,897 + ABZR86_RS15565 0.78 +1.3 3,503,897 + ABZR86_RS15565 0.78 -4.0 3,503,897 + ABZR86_RS15565 0.78 -0.5 3,503,898 - ABZR86_RS15565 0.78 +1.0 3,503,898 - ABZR86_RS15565 0.78 -0.5 3,503,898 - ABZR86_RS15565 0.78 -0.7 3,503,898 - ABZR86_RS15565 0.78 -2.6 3,503,898 - ABZR86_RS15565 0.78 -0.0 3,503,898 - ABZR86_RS15565 0.78 -0.6 3,504,069 - +0.8 3,504,113 + -1.6 3,504,113 + -0.6 3,504,114 - -0.8 3,504,114 - -0.4 3,504,114 - -0.6 3,504,114 - +0.6 3,504,114 - -0.5 3,504,164 + +0.2 3,504,164 + -1.4 3,504,164 + -1.8 3,504,164 + +0.9 3,504,164 + +1.1 3,504,164 + -0.2 3,504,164 + -0.7 3,504,164 + -1.7 3,504,164 + +0.8 3,504,164 + +1.3 3,504,164 + -1.9 3,504,164 + -1.0 3,504,164 + -1.5 3,504,164 + -1.1 3,504,164 + +0.8 3,504,165 - -0.5 3,504,165 - -0.5 3,504,165 - -1.4 3,504,165 - -0.0 3,504,165 - +0.7 3,504,165 - +0.1 3,504,165 - -0.1 3,504,165 - +0.5 3,504,165 - -1.5 3,504,165 - -0.8 3,504,165 - -1.0 3,504,165 - -1.4 3,504,165 - -1.1 3,504,165 - -0.9 3,504,165 - -1.3 3,504,165 - +0.6 3,504,165 - -1.7 3,504,165 - -0.5 3,504,165 - -2.4 3,504,165 - -0.1 3,504,165 - -0.3 3,504,165 - -0.0 3,504,165 - -0.4 3,504,168 + -1.9 3,504,168 + -3.3 3,504,168 + -0.3 3,504,168 + -1.4 3,504,168 + -0.4 3,504,168 + +0.7 3,504,168 + -3.2 3,504,169 - +0.1 3,504,169 - -0.1 3,504,169 - -0.1 3,504,178 + -0.2 3,504,178 + -0.4 3,504,178 + -3.5 3,504,178 + +1.6 3,504,178 + -0.8 3,504,178 + -0.8 3,504,178 + -2.8 3,504,178 + -1.6 3,504,178 + -0.9 3,504,179 - -1.9 3,504,179 - +0.1 3,504,179 - -0.8 3,504,179 - -0.1 3,504,179 - -0.5 3,504,179 - +0.2 3,504,179 - +0.9 3,504,232 + -0.5 3,504,232 + +0.3 3,504,232 + -1.1 3,504,232 + -1.7 3,504,232 + -0.1 3,504,232 + -0.2 3,504,232 + -1.0 3,504,232 + -1.2 3,504,232 + -0.4 3,504,232 + -0.1 3,504,233 - -0.4 3,504,233 - +0.7 3,504,233 - -0.6 3,504,233 - -3.7 3,504,233 - +1.3 3,504,233 - -0.6 3,504,233 - +0.8 3,504,233 - -1.6 3,504,233 - -0.2 3,504,233 - -2.5 3,504,317 + -0.3 3,504,317 + +0.2 3,504,317 + -0.1 3,504,317 + +1.2 3,504,317 + -1.5 3,504,317 + +0.3 3,504,317 + +0.0 3,504,317 + +1.4 3,504,317 + +0.8 3,504,317 + -0.3 3,504,317 + +1.3 3,504,318 - +0.7 3,504,318 - -0.2 3,504,318 - -0.5 3,504,318 - +0.2 3,504,331 - -2.8 3,504,331 - +0.8 3,504,331 - -1.5 3,504,331 - -0.5 3,504,582 + +0.6 3,504,582 + +1.7 3,504,582 + +0.3 3,504,582 + +0.8 3,504,582 + -0.9 3,504,582 + -0.2 3,504,582 + +0.2 3,504,582 + -0.2 3,504,582 + -0.8 3,504,582 + +0.3 3,504,583 - -0.1 3,505,482 + +1.6 3,505,482 + -2.4 3,505,483 - -0.8 3,505,483 - -1.3 3,505,540 + +0.1 3,505,540 + -0.3 3,505,540 + +2.2 3,505,540 + +0.2 3,505,540 + +1.3 3,505,540 + -0.3 3,505,540 + -1.6 3,505,540 + -0.7 3,505,540 + -2.5 3,505,540 + +0.3 3,505,540 + -1.7 3,505,540 + -1.2 3,505,541 - -0.4 3,505,541 - -0.1 3,505,541 - -2.6 3,505,541 - +0.5 3,505,541 - +0.2 3,505,541 - +2.0 3,505,545 + -0.4 3,505,545 + +1.3 3,505,545 + -0.7 3,505,545 + -0.1 3,505,546 - +1.2 3,505,546 - +0.2 3,505,546 - +0.4 3,505,546 - +2.3 3,505,584 + -2.2 3,505,584 + -0.0 3,505,584 + -1.5 3,505,584 + -0.9 3,505,584 + +1.6 3,505,584 + +0.2 3,505,585 - +0.8 3,505,585 - +1.9 3,505,585 - -3.2 3,505,585 - -2.6 3,505,585 - -0.9 3,505,585 - -0.9
Or see this region's nucleotide sequence