Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,382,159	+		ABZR86_RS15040	0.55	+0.1
3,382,159	+		ABZR86_RS15040	0.55	+0.1
3,382,159	+		ABZR86_RS15040	0.55	+1.8
3,382,159	+		ABZR86_RS15040	0.55	+1.1
3,382,159	+		ABZR86_RS15040	0.55	+1.3
3,382,159	+		ABZR86_RS15040	0.55	-4.1
3,382,159	+		ABZR86_RS15040	0.55	+1.6
3,382,159	+		ABZR86_RS15040	0.55	+1.5
3,382,159	+		ABZR86_RS15040	0.55	+1.2
3,382,159	+		ABZR86_RS15040	0.55	-1.0
3,382,159	+		ABZR86_RS15040	0.55	+0.2
3,382,159	+		ABZR86_RS15040	0.55	-1.0
3,382,159	+		ABZR86_RS15040	0.55	+0.1
3,382,160	-		ABZR86_RS15040	0.55	+0.6
3,382,160	-		ABZR86_RS15040	0.55	-0.1
3,382,160	-		ABZR86_RS15040	0.55	+0.3
3,382,160	-		ABZR86_RS15040	0.55	+1.7
3,382,160	-		ABZR86_RS15040	0.55	+0.2
3,382,160	-		ABZR86_RS15040	0.55	+0.5
3,382,160	-		ABZR86_RS15040	0.55	-3.2
3,382,160	-		ABZR86_RS15040	0.55	-0.3
3,382,160	-		ABZR86_RS15040	0.55	-3.2
3,382,160	-		ABZR86_RS15040	0.55	-0.8
3,382,160	-		ABZR86_RS15040	0.55	-1.0
3,382,306	+		ABZR86_RS15040	0.66	-0.6
3,382,306	+		ABZR86_RS15040	0.66	-0.6
3,382,306	+		ABZR86_RS15040	0.66	+0.5
3,382,307	-		ABZR86_RS15040	0.66	-1.0
3,382,307	-		ABZR86_RS15040	0.66	+0.8
3,382,307	-		ABZR86_RS15040	0.66	+0.8
3,382,307	-		ABZR86_RS15040	0.66	+1.4
3,382,489	+		ABZR86_RS15040	0.80	+0.1
3,382,489	+		ABZR86_RS15040	0.80	-1.5
3,382,489	+		ABZR86_RS15040	0.80	+0.5
3,382,489	+		ABZR86_RS15040	0.80	+1.0
3,382,489	+		ABZR86_RS15040	0.80	-2.7
3,382,489	+		ABZR86_RS15040	0.80	-0.2
3,382,489	+		ABZR86_RS15040	0.80	+1.5
3,382,489	+		ABZR86_RS15040	0.80	+0.3
3,382,489	+		ABZR86_RS15040	0.80	-0.1
3,382,489	+		ABZR86_RS15040	0.80	+0.4
3,382,489	+		ABZR86_RS15040	0.80	-2.5
3,382,489	+		ABZR86_RS15040	0.80	-0.2
3,382,489	+		ABZR86_RS15040	0.80	-0.5
3,382,489	+		ABZR86_RS15040	0.80	+2.3
3,382,489	+		ABZR86_RS15040	0.80	+0.7
3,382,489	+		ABZR86_RS15040	0.80	+0.5
3,382,489	+		ABZR86_RS15040	0.80	+1.3
3,382,490	-		ABZR86_RS15040	0.80	-0.0
3,382,490	-		ABZR86_RS15040	0.80	+0.9
3,382,490	-		ABZR86_RS15040	0.80	+0.1
3,382,490	-		ABZR86_RS15040	0.80	-1.1
3,382,490	-		ABZR86_RS15040	0.80	-0.1
3,382,490	-		ABZR86_RS15040	0.80	+0.1
3,382,490	-		ABZR86_RS15040	0.80	+0.4
3,382,490	-		ABZR86_RS15040	0.80	-3.6
3,382,490	-		ABZR86_RS15040	0.80	+0.8
3,382,490	-		ABZR86_RS15040	0.80	+1.6
3,382,490	-		ABZR86_RS15040	0.80	+3.1
3,382,490	-		ABZR86_RS15040	0.80	+1.0
3,382,490	-		ABZR86_RS15040	0.80	+0.3
3,382,490	-		ABZR86_RS15040	0.80	-0.1
3,382,490	-		ABZR86_RS15040	0.80	-1.2
3,382,490	-		ABZR86_RS15040	0.80	+0.1
3,382,614	+		ABZR86_RS15040	0.89	+0.0
3,382,614	+		ABZR86_RS15040	0.89	-2.4
3,382,615	-		ABZR86_RS15040	0.89	+0.9
3,382,747	+				-2.9
3,382,747	+				+1.1
3,382,756	+				-1.8
3,382,756	+				-1.0
3,382,756	+				+0.4
3,382,756	+				-1.7
3,382,796	+				-4.2
3,382,796	+				+0.2
3,382,796	+				+0.3
3,382,796	+				-0.7
3,382,796	+				+0.6
3,382,796	+				-1.4
3,382,797	-				+0.7
3,382,797	-				-0.5
3,382,797	-				-2.6
3,382,797	-				+0.9
3,382,797	-				+0.4
3,382,797	-				+0.0
3,382,817	+				-0.5
3,382,817	+				+0.7
3,382,817	+				+0.6
3,382,817	+				-0.5
3,382,817	+				-3.6
3,382,817	+				-0.3
3,382,818	-				-1.1
3,382,818	-				-1.5
3,382,818	-				-0.7
3,382,818	-				-0.5
3,382,818	-				+0.6
3,382,917	+		ABZR86_RS15045	0.19	-2.3
3,382,917	+		ABZR86_RS15045	0.19	-0.2
3,382,918	-		ABZR86_RS15045	0.20	-0.4
3,382,918	-		ABZR86_RS15045	0.20	-0.7
3,382,977	+		ABZR86_RS15045	0.29	+0.0
3,382,977	+		ABZR86_RS15045	0.29	-2.1
3,382,977	+		ABZR86_RS15045	0.29	-0.7
3,382,977	+		ABZR86_RS15045	0.29	+0.5
3,382,977	+		ABZR86_RS15045	0.29	-0.5
3,382,978	-		ABZR86_RS15045	0.29	-3.9
3,382,978	-		ABZR86_RS15045	0.29	-0.2
3,382,978	-		ABZR86_RS15045	0.29	-1.2
3,382,989	+		ABZR86_RS15045	0.31	-0.7
3,382,989	+		ABZR86_RS15045	0.31	-1.1
3,382,989	+		ABZR86_RS15045	0.31	+0.6
3,382,989	+		ABZR86_RS15045	0.31	-1.3
3,382,989	+		ABZR86_RS15045	0.31	+0.6
3,382,989	+		ABZR86_RS15045	0.31	+0.3
3,382,989	+		ABZR86_RS15045	0.31	-3.8
3,382,989	+		ABZR86_RS15045	0.31	-0.8
3,382,989	+		ABZR86_RS15045	0.31	+0.5
3,382,989	+		ABZR86_RS15045	0.31	-0.6
3,382,989	+		ABZR86_RS15045	0.31	-1.3
3,382,989	+		ABZR86_RS15045	0.31	-1.5
3,382,989	+		ABZR86_RS15045	0.31	-2.7
3,382,989	+		ABZR86_RS15045	0.31	-1.3
3,382,989	+		ABZR86_RS15045	0.31	-0.2
3,382,989	+		ABZR86_RS15045	0.31	-2.4
3,382,989	+		ABZR86_RS15045	0.31	+0.9
3,382,990	-		ABZR86_RS15045	0.31	-0.6
3,382,990	-		ABZR86_RS15045	0.31	-0.1
3,382,990	-		ABZR86_RS15045	0.31	-0.4
3,382,990	-		ABZR86_RS15045	0.31	+0.1
3,382,990	-		ABZR86_RS15045	0.31	-1.6
3,382,990	-		ABZR86_RS15045	0.31	-0.3
3,382,990	-		ABZR86_RS15045	0.31	+0.3
3,382,990	-		ABZR86_RS15045	0.31	-3.0
3,382,990	-		ABZR86_RS15045	0.31	+1.1
3,382,990	-		ABZR86_RS15045	0.31	-0.6
3,382,990	-		ABZR86_RS15045	0.31	-1.2
3,382,990	-		ABZR86_RS15045	0.31	-2.1
3,382,990	-		ABZR86_RS15045	0.31	-2.8
3,382,990	-		ABZR86_RS15045	0.31	-0.6
3,382,990	-		ABZR86_RS15045	0.31	-1.0
3,382,990	-		ABZR86_RS15045	0.31	+0.8
3,382,990	-		ABZR86_RS15045	0.31	-1.9
3,382,990	-		ABZR86_RS15045	0.31	+0.3
3,382,990	-		ABZR86_RS15045	0.31	-0.6
3,382,990	-		ABZR86_RS15045	0.31	-0.5
3,382,990	-		ABZR86_RS15045	0.31	-1.8
3,382,990	-		ABZR86_RS15045	0.31	-0.6
3,382,990	-		ABZR86_RS15045	0.31	-0.3
3,383,115	-		ABZR86_RS15045	0.51	+0.0
3,383,199	+		ABZR86_RS15045	0.65	-0.7
3,383,199	+		ABZR86_RS15045	0.65	-1.9
3,383,199	+		ABZR86_RS15045	0.65	+0.3
3,383,199	+		ABZR86_RS15045	0.65	-0.7
3,383,199	+		ABZR86_RS15045	0.65	-0.2
3,383,200	-		ABZR86_RS15045	0.65	+0.2
3,383,200	-		ABZR86_RS15045	0.65	-0.0
3,383,200	-		ABZR86_RS15045	0.65	-3.1
3,383,200	-		ABZR86_RS15045	0.65	+0.1
3,383,200	-		ABZR86_RS15045	0.65	+0.0
3,383,200	-		ABZR86_RS15045	0.65	-0.4
3,383,200	-		ABZR86_RS15045	0.65	-0.2
3,383,238	+		ABZR86_RS15045	0.71	-2.4
3,383,238	+		ABZR86_RS15045	0.71	+0.0
3,383,238	+		ABZR86_RS15045	0.71	-0.1
3,383,238	+		ABZR86_RS15045	0.71	+1.3
3,383,238	+		ABZR86_RS15045	0.71	-1.1
3,383,238	+		ABZR86_RS15045	0.71	+0.2
3,383,239	-		ABZR86_RS15045	0.72	-0.0
3,383,239	-		ABZR86_RS15045	0.72	+0.9
3,383,239	-		ABZR86_RS15045	0.72	+0.2
3,383,239	-		ABZR86_RS15045	0.72	+1.0
3,383,239	-		ABZR86_RS15045	0.72	+1.4
3,383,239	-		ABZR86_RS15045	0.72	+0.5
3,383,239	-		ABZR86_RS15045	0.72	-2.2
3,383,331	+		ABZR86_RS15045	0.86	+0.3
3,383,412	+				+0.6
3,383,412	+				+0.2
3,383,412	+				+0.1
3,383,412	+				+0.9
3,383,413	-				+0.4
3,383,475	+				-0.5
3,383,475	+				-0.7
3,383,475	+				+0.4
3,383,475	+				+0.5
3,383,475	+				+0.5
3,383,475	+				+0.5
3,383,476	-				-2.5
3,383,476	-				+0.5
3,383,476	-				+1.5
3,383,682	+		ABZR86_RS15050	0.58	+0.7
3,383,682	+		ABZR86_RS15050	0.58	+0.4
3,383,682	+		ABZR86_RS15050	0.58	+0.9
3,383,682	+		ABZR86_RS15050	0.58	+0.3
3,383,682	+		ABZR86_RS15050	0.58	+0.6
3,383,682	+		ABZR86_RS15050	0.58	+0.6
3,383,682	+		ABZR86_RS15050	0.58	+0.1
3,383,682	+		ABZR86_RS15050	0.58	-0.3
3,383,682	+		ABZR86_RS15050	0.58	+0.5
3,383,682	+		ABZR86_RS15050	0.58	-1.6
3,383,682	+		ABZR86_RS15050	0.58	-2.6
3,383,682	+		ABZR86_RS15050	0.58	-0.5
3,383,682	+		ABZR86_RS15050	0.58	+0.4
3,383,682	+		ABZR86_RS15050	0.58	-0.1
3,383,682	+		ABZR86_RS15050	0.58	+1.3
3,383,683	-		ABZR86_RS15050	0.58	-0.4
3,383,683	-		ABZR86_RS15050	0.58	-3.4
3,383,683	-		ABZR86_RS15050	0.58	+0.4
3,383,683	-		ABZR86_RS15050	0.58	-0.8
3,383,683	-		ABZR86_RS15050	0.58	+0.3
3,383,683	-		ABZR86_RS15050	0.58	+0.0
3,383,683	-		ABZR86_RS15050	0.58	-0.1
3,383,683	-		ABZR86_RS15050	0.58	+0.5
3,383,683	-		ABZR86_RS15050	0.58	-0.4
3,383,683	-		ABZR86_RS15050	0.58	+0.5
3,383,683	-		ABZR86_RS15050	0.58	-3.5
3,383,683	-		ABZR86_RS15050	0.58	-3.5
3,383,683	-		ABZR86_RS15050	0.58	+2.2
3,383,683	-		ABZR86_RS15050	0.58	-0.5
3,383,683	-		ABZR86_RS15050	0.58	+1.1
3,383,683	-		ABZR86_RS15050	0.58	-0.3
3,383,683	-		ABZR86_RS15050	0.58	-0.3
3,383,683	-		ABZR86_RS15050	0.58	-1.4
3,383,683	-		ABZR86_RS15050	0.58	-0.2
3,383,683	-		ABZR86_RS15050	0.58	+0.2
3,383,847	+				-0.2
3,383,847	+				+0.2
3,383,848	-				-0.5
3,383,848	-				-0.3
3,383,848	-				-2.0
3,383,848	-				+0.1
3,383,848	-				-0.5
3,383,848	-				-0.1
3,383,848	-				-0.3
3,383,999	+				-0.3
3,383,999	+				+1.4
3,384,000	-				+0.2
3,384,000	-				+1.3
3,384,000	-				-0.4
3,384,000	-				-0.3
3,384,000	-				-1.1
3,384,152	+		ABZR86_RS15055	0.11	-3.5
3,384,152	+		ABZR86_RS15055	0.11	-1.4
3,384,152	+		ABZR86_RS15055	0.11	-0.6
3,384,152	+		ABZR86_RS15055	0.11	+0.2
3,384,153	-		ABZR86_RS15055	0.11	-2.7
3,384,153	-		ABZR86_RS15055	0.11	-1.6
3,384,153	-		ABZR86_RS15055	0.11	-0.4
3,384,153	-		ABZR86_RS15055	0.11	-2.6
3,384,204	-		ABZR86_RS15055	0.13	+0.3
3,384,236	+		ABZR86_RS15055	0.15	+1.3
3,384,237	-		ABZR86_RS15055	0.15	-0.1
3,384,247	-		ABZR86_RS15055	0.15	-1.4
3,384,248	+		ABZR86_RS15055	0.15	+0.6
3,384,248	+		ABZR86_RS15055	0.15	+0.8
3,384,248	+		ABZR86_RS15055	0.15	+1.6
3,384,248	+		ABZR86_RS15055	0.15	+0.1
3,384,248	+		ABZR86_RS15055	0.15	-0.2
3,384,249	-		ABZR86_RS15055	0.15	+1.2
3,384,249	-		ABZR86_RS15055	0.15	-1.4
3,384,249	-		ABZR86_RS15055	0.15	-1.8
3,384,249	-		ABZR86_RS15055	0.15	-0.8
3,384,249	-		ABZR86_RS15055	0.15	-0.1
3,384,249	-		ABZR86_RS15055	0.15	+1.1
3,384,249	-		ABZR86_RS15055	0.15	+0.6
3,384,249	-		ABZR86_RS15055	0.15	-1.9
3,384,260	+		ABZR86_RS15055	0.16	+0.8
3,384,260	+		ABZR86_RS15055	0.16	+0.9
3,384,260	+		ABZR86_RS15055	0.16	+0.8
3,384,261	-		ABZR86_RS15055	0.16	-2.1
3,384,261	-		ABZR86_RS15055	0.16	+0.6
3,384,344	+		ABZR86_RS15055	0.19	-2.4
3,384,353	+		ABZR86_RS15055	0.20	-2.4
3,384,353	+		ABZR86_RS15055	0.20	+0.9
3,384,353	+		ABZR86_RS15055	0.20	-0.7
3,384,354	-		ABZR86_RS15055	0.20	+0.7