Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,118,556	+		ABZR86_RS13995	0.12	-2.7
3,118,557	-		ABZR86_RS13995	0.12	+0.0
3,118,564	+		ABZR86_RS13995	0.16	+0.1
3,118,565	-		ABZR86_RS13995	0.16	+0.5
3,118,565	-		ABZR86_RS13995	0.16	+0.0
3,118,594	+		ABZR86_RS13995	0.30	-0.3
3,118,595	-		ABZR86_RS13995	0.30	+1.5
3,118,595	-		ABZR86_RS13995	0.30	-1.9
3,118,666	+		ABZR86_RS13995	0.64	+0.8
3,118,666	+		ABZR86_RS13995	0.64	+0.4
3,118,666	+		ABZR86_RS13995	0.64	+0.2
3,118,667	-		ABZR86_RS13995	0.65	+0.5
3,118,667	-		ABZR86_RS13995	0.65	-0.3
3,118,713	-		ABZR86_RS13995	0.87	+0.2
3,118,757	+				+0.9
3,118,758	-				+0.2
3,118,868	+				+1.0
3,118,868	+				-1.6
3,118,958	+		ABZR86_RS14000	0.15	-0.1
3,118,958	+		ABZR86_RS14000	0.15	+0.1
3,118,958	+		ABZR86_RS14000	0.15	+0.5
3,118,958	+		ABZR86_RS14000	0.15	-1.2
3,118,959	-		ABZR86_RS14000	0.15	+0.9
3,118,973	+		ABZR86_RS14000	0.17	+1.6
3,118,973	+		ABZR86_RS14000	0.17	+0.1
3,118,978	-		ABZR86_RS14000	0.18	-1.0
3,119,033	+		ABZR86_RS14000	0.27	+0.6
3,119,033	+		ABZR86_RS14000	0.27	+0.1
3,119,033	+		ABZR86_RS14000	0.27	-0.1
3,119,034	-		ABZR86_RS14000	0.27	+0.4
3,119,036	+		ABZR86_RS14000	0.27	+0.7
3,119,036	+		ABZR86_RS14000	0.27	+0.8
3,119,037	-		ABZR86_RS14000	0.27	+0.6
3,119,037	-		ABZR86_RS14000	0.27	+0.6
3,119,037	-		ABZR86_RS14000	0.27	-4.3
3,119,060	+		ABZR86_RS14000	0.31	-0.7
3,119,060	+		ABZR86_RS14000	0.31	+0.5
3,119,060	+		ABZR86_RS14000	0.31	+0.4
3,119,060	+		ABZR86_RS14000	0.31	-2.4
3,119,060	+		ABZR86_RS14000	0.31	+0.1
3,119,060	+		ABZR86_RS14000	0.31	+0.5
3,119,060	+		ABZR86_RS14000	0.31	+0.1
3,119,060	+		ABZR86_RS14000	0.31	-2.9
3,119,060	+		ABZR86_RS14000	0.31	-0.0
3,119,061	-		ABZR86_RS14000	0.31	+0.0
3,119,061	-		ABZR86_RS14000	0.31	+0.0
3,119,069	+		ABZR86_RS14000	0.32	+0.7
3,119,069	+		ABZR86_RS14000	0.32	-0.4
3,119,069	+		ABZR86_RS14000	0.32	-1.2
3,119,069	+		ABZR86_RS14000	0.32	+0.6
3,119,069	+		ABZR86_RS14000	0.32	+0.9
3,119,070	-		ABZR86_RS14000	0.32	-1.7
3,119,165	-		ABZR86_RS14000	0.47	-1.1
3,119,168	+		ABZR86_RS14000	0.48	+0.8
3,119,168	+		ABZR86_RS14000	0.48	-2.5
3,119,168	+		ABZR86_RS14000	0.48	+1.1
3,119,168	+		ABZR86_RS14000	0.48	+1.3
3,119,169	-		ABZR86_RS14000	0.48	+0.4
3,119,169	-		ABZR86_RS14000	0.48	+0.1
3,119,169	-		ABZR86_RS14000	0.48	-1.9
3,119,169	-		ABZR86_RS14000	0.48	+0.5
3,119,220	+		ABZR86_RS14000	0.56	+0.8
3,119,220	+		ABZR86_RS14000	0.56	+0.5
3,119,221	-		ABZR86_RS14000	0.56	+0.6
3,119,287	+		ABZR86_RS14000	0.67	+0.1
3,119,287	+		ABZR86_RS14000	0.67	+0.8
3,119,287	+		ABZR86_RS14000	0.67	-1.2
3,119,288	-		ABZR86_RS14000	0.67	+1.3
3,119,288	-		ABZR86_RS14000	0.67	+1.4
3,119,549	+				-0.3
3,119,549	+				+1.2
3,119,550	-				+0.9
3,119,550	-				-0.7
3,119,554	+				+2.2
3,119,641	-		ABZR86_RS14005	0.18	+0.2
3,119,679	+		ABZR86_RS14005	0.26	-0.5
3,119,746	-		ABZR86_RS14005	0.39	-0.1
3,119,750	+		ABZR86_RS14005	0.40	+0.7
3,119,751	-		ABZR86_RS14005	0.40	-0.7
3,119,764	+		ABZR86_RS14005	0.43	+2.1
3,119,764	+		ABZR86_RS14005	0.43	+1.9
3,119,765	-		ABZR86_RS14005	0.43	+0.9
3,119,765	-		ABZR86_RS14005	0.43	+0.9
3,119,765	-		ABZR86_RS14005	0.43	+1.0
3,119,765	-		ABZR86_RS14005	0.43	+0.3
3,119,765	-		ABZR86_RS14005	0.43	+1.2
3,119,765	-		ABZR86_RS14005	0.43	+1.4
3,119,885	+		ABZR86_RS14005	0.68	+0.8
3,119,889	+		ABZR86_RS14005	0.69	-0.7
3,119,890	-		ABZR86_RS14005	0.69	+0.0
3,119,933	+		ABZR86_RS14005	0.78	-1.9
3,119,934	-		ABZR86_RS14005	0.78	+0.6
3,119,934	-		ABZR86_RS14005	0.78	-4.3
3,119,940	+		ABZR86_RS14005	0.79	-1.5
3,119,987	+		ABZR86_RS14005	0.89	-0.2
3,119,988	-		ABZR86_RS14005	0.89	-0.4
3,119,988	-		ABZR86_RS14005	0.89	+0.5
3,119,995	+				+0.8
3,119,995	+				-1.0
3,119,996	-				-1.1
3,119,998	-				-0.2
3,120,023	+				+0.4
3,120,155	+				+0.9
3,120,180	+				-0.2
3,120,180	+				-0.9
3,120,181	-				+0.8
3,120,181	-				+1.0
3,120,185	-				+1.8
3,120,185	-				-0.9
3,120,210	+				-1.0
3,120,211	-				-0.4
3,120,277	+				+1.0
3,120,277	+				-2.6
3,120,278	-				-2.7
3,120,294	+				-1.1
3,120,295	-				+1.2
3,120,295	-				-1.6
3,120,315	+				-1.3
3,120,315	+				+0.7
3,120,316	-				+0.7
3,120,388	+				+0.7
3,120,389	-				-0.2
3,120,398	+				-0.7
3,120,399	-				+0.7
3,120,435	+				+1.5
3,120,435	+				-0.7
3,120,435	+				+0.1
3,120,436	-				+1.2
3,120,519	-		ABZR86_RS14010	0.10	+0.4
3,120,519	-		ABZR86_RS14010	0.10	-0.3
3,120,540	+		ABZR86_RS14010	0.11	-0.2
3,120,540	+		ABZR86_RS14010	0.11	-1.9
3,120,541	-		ABZR86_RS14010	0.11	+1.2
3,120,541	-		ABZR86_RS14010	0.11	-0.0
3,120,541	-		ABZR86_RS14010	0.11	+0.4
3,120,541	-		ABZR86_RS14010	0.11	-0.2
3,120,541	-		ABZR86_RS14010	0.11	+0.7
3,120,598	-		ABZR86_RS14010	0.12	-1.1
3,120,618	+		ABZR86_RS14010	0.13	-1.4
3,120,618	+		ABZR86_RS14010	0.13	+0.4
3,120,618	+		ABZR86_RS14010	0.13	+0.3
3,120,618	+		ABZR86_RS14010	0.13	-0.5
3,120,618	+		ABZR86_RS14010	0.13	+0.6
3,120,619	-		ABZR86_RS14010	0.13	-0.1
3,120,622	+		ABZR86_RS14010	0.13	-2.1
3,120,622	+		ABZR86_RS14010	0.13	+0.5
3,120,622	+		ABZR86_RS14010	0.13	-1.6
3,120,639	+		ABZR86_RS14010	0.13	-0.6
3,120,661	+		ABZR86_RS14010	0.13	+0.5
3,120,661	+		ABZR86_RS14010	0.13	+0.2
3,120,661	+		ABZR86_RS14010	0.13	-0.0
3,120,662	-		ABZR86_RS14010	0.13	-0.6
3,120,662	-		ABZR86_RS14010	0.13	+0.6
3,120,663	+		ABZR86_RS14010	0.13	-3.2
3,120,664	-		ABZR86_RS14010	0.14	-0.3
3,120,664	-		ABZR86_RS14010	0.14	-1.5
3,120,693	+		ABZR86_RS14010	0.14	-0.8
3,120,694	-		ABZR86_RS14010	0.14	+0.8
3,120,742	-		ABZR86_RS14010	0.15	+0.6
3,120,755	+		ABZR86_RS14010	0.15	+1.2
3,120,816	+		ABZR86_RS14010	0.17	-0.9
3,120,816	+		ABZR86_RS14010	0.17	+0.3
3,120,858	-		ABZR86_RS14010	0.18	+1.0
3,120,882	+		ABZR86_RS14010	0.18	+1.2
3,120,883	-		ABZR86_RS14010	0.18	-1.0
3,120,922	+		ABZR86_RS14010	0.19	+1.0
3,120,923	-		ABZR86_RS14010	0.19	-0.7
3,120,923	-		ABZR86_RS14010	0.19	+0.9
3,120,923	-		ABZR86_RS14010	0.19	-0.2
3,120,933	+		ABZR86_RS14010	0.19	-2.4
3,121,002	+		ABZR86_RS14010	0.21	+1.5
3,121,002	+		ABZR86_RS14010	0.21	+0.6
3,121,003	-		ABZR86_RS14010	0.21	+1.8
3,121,003	-		ABZR86_RS14010	0.21	+0.4
3,121,006	+		ABZR86_RS14010	0.21	+0.2
3,121,006	+		ABZR86_RS14010	0.21	+1.1
3,121,006	+		ABZR86_RS14010	0.21	+1.2
3,121,007	-		ABZR86_RS14010	0.21	+0.1
3,121,007	-		ABZR86_RS14010	0.21	-0.2
3,121,007	-		ABZR86_RS14010	0.21	-0.6
3,121,009	-		ABZR86_RS14010	0.21	+0.3
3,121,009	-		ABZR86_RS14010	0.21	+0.8