Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13580 and ABZR86_RS13585 are separated by 0 nucleotides ABZR86_RS13585 and ABZR86_RS13590 are separated by 95 nucleotides
ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121
_RS13580
ABZR86_RS13585: ABZR86_RS13585 - DUF4850 domain-containing protein, at 3,040,122 to 3,040,898
_RS13585
ABZR86_RS13590: ABZR86_RS13590 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 3,040,994 to 3,042,361
_RS13590
Position (kb)
3040
3041 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3039.193 kb on - strand at 3039.193 kb on - strand at 3039.289 kb on - strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.690 kb on + strand, within ABZR86_RS13580 at 3039.691 kb on - strand, within ABZR86_RS13580 at 3039.691 kb on - strand, within ABZR86_RS13580 at 3039.691 kb on - strand, within ABZR86_RS13580 at 3039.691 kb on - strand, within ABZR86_RS13580 at 3039.981 kb on + strand, within ABZR86_RS13580 at 3039.982 kb on - strand, within ABZR86_RS13580 at 3039.982 kb on - strand, within ABZR86_RS13580 at 3039.982 kb on - strand, within ABZR86_RS13580 at 3039.982 kb on - strand, within ABZR86_RS13580 at 3039.982 kb on - strand, within ABZR86_RS13580 at 3040.113 kb on + strand at 3040.114 kb on - strand at 3040.222 kb on + strand, within ABZR86_RS13585 at 3040.223 kb on - strand, within ABZR86_RS13585 at 3040.264 kb on - strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.588 kb on + strand, within ABZR86_RS13585 at 3040.588 kb on + strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.762 kb on + strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.787 kb on - strand, within ABZR86_RS13585 at 3040.995 kb on + strand at 3040.995 kb on + strand at 3040.996 kb on - strand at 3040.996 kb on - strand at 3040.996 kb on - strand at 3040.996 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,039,193 - -3.6 3,039,193 - +0.4 3,039,289 - ABZR86_RS13580 0.16 +0.5 3,039,337 + ABZR86_RS13580 0.21 -0.6 3,039,337 + ABZR86_RS13580 0.21 -2.0 3,039,337 + ABZR86_RS13580 0.21 -0.3 3,039,337 + ABZR86_RS13580 0.21 -0.2 3,039,337 + ABZR86_RS13580 0.21 -0.5 3,039,337 + ABZR86_RS13580 0.21 +0.1 3,039,338 - ABZR86_RS13580 0.21 -0.2 3,039,338 - ABZR86_RS13580 0.21 +0.2 3,039,338 - ABZR86_RS13580 0.21 +1.5 3,039,537 + ABZR86_RS13580 0.41 -0.7 3,039,537 + ABZR86_RS13580 0.41 +2.0 3,039,537 + ABZR86_RS13580 0.41 +1.4 3,039,537 + ABZR86_RS13580 0.41 +1.3 3,039,537 + ABZR86_RS13580 0.41 -0.6 3,039,538 - ABZR86_RS13580 0.41 +0.1 3,039,538 - ABZR86_RS13580 0.41 +0.3 3,039,538 - ABZR86_RS13580 0.41 +0.3 3,039,579 + ABZR86_RS13580 0.45 -0.0 3,039,579 + ABZR86_RS13580 0.45 -0.2 3,039,579 + ABZR86_RS13580 0.45 +0.2 3,039,579 + ABZR86_RS13580 0.45 -0.7 3,039,579 + ABZR86_RS13580 0.45 +2.0 3,039,690 + ABZR86_RS13580 0.56 -2.7 3,039,691 - ABZR86_RS13580 0.57 +1.2 3,039,691 - ABZR86_RS13580 0.57 -0.7 3,039,691 - ABZR86_RS13580 0.57 +0.7 3,039,691 - ABZR86_RS13580 0.57 -1.1 3,039,981 + ABZR86_RS13580 0.86 +0.8 3,039,982 - ABZR86_RS13580 0.86 -0.3 3,039,982 - ABZR86_RS13580 0.86 -2.7 3,039,982 - ABZR86_RS13580 0.86 +2.0 3,039,982 - ABZR86_RS13580 0.86 -0.4 3,039,982 - ABZR86_RS13580 0.86 +0.6 3,040,113 + -1.0 3,040,114 - -2.2 3,040,222 + ABZR86_RS13585 0.13 -0.4 3,040,223 - ABZR86_RS13585 0.13 -0.8 3,040,264 - ABZR86_RS13585 0.18 -1.0 3,040,426 + ABZR86_RS13585 0.39 +0.2 3,040,426 + ABZR86_RS13585 0.39 +0.4 3,040,426 + ABZR86_RS13585 0.39 -3.7 3,040,426 + ABZR86_RS13585 0.39 +0.1 3,040,427 - ABZR86_RS13585 0.39 -0.1 3,040,427 - ABZR86_RS13585 0.39 +2.1 3,040,427 - ABZR86_RS13585 0.39 +1.0 3,040,427 - ABZR86_RS13585 0.39 -2.5 3,040,427 - ABZR86_RS13585 0.39 -0.8 3,040,427 - ABZR86_RS13585 0.39 -1.3 3,040,588 + ABZR86_RS13585 0.60 -1.2 3,040,588 + ABZR86_RS13585 0.60 +0.2 3,040,589 - ABZR86_RS13585 0.60 -1.2 3,040,589 - ABZR86_RS13585 0.60 +1.0 3,040,589 - ABZR86_RS13585 0.60 +1.0 3,040,589 - ABZR86_RS13585 0.60 -1.0 3,040,762 + ABZR86_RS13585 0.82 +1.1 3,040,763 - ABZR86_RS13585 0.82 -0.0 3,040,763 - ABZR86_RS13585 0.82 +0.6 3,040,763 - ABZR86_RS13585 0.82 -1.1 3,040,786 + ABZR86_RS13585 0.85 +1.2 3,040,786 + ABZR86_RS13585 0.85 -0.8 3,040,786 + ABZR86_RS13585 0.85 +0.4 3,040,786 + ABZR86_RS13585 0.85 -2.2 3,040,787 - ABZR86_RS13585 0.86 -0.5 3,040,995 + +0.3 3,040,995 + -2.6 3,040,996 - -0.0 3,040,996 - +1.1 3,040,996 - +0.6 3,040,996 - -0.1
Or see this region's nucleotide sequence