Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11655 and ABZR86_RS11660 are separated by 1 nucleotides ABZR86_RS11660 and ABZR86_RS11665 are separated by 78 nucleotides ABZR86_RS11665 and ABZR86_RS11670 are separated by 107 nucleotides
ABZR86_RS11655: ABZR86_RS11655 - SLC13 family permease, at 2,609,108 to 2,610,925
_RS11655
ABZR86_RS11660: ABZR86_RS11660 - Rieske 2Fe-2S domain-containing protein, at 2,610,927 to 2,611,268
_RS11660
ABZR86_RS11665: ABZR86_RS11665 - hypothetical protein, at 2,611,347 to 2,611,631
_RS11665
ABZR86_RS11670: ABZR86_RS11670 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 2,611,739 to 2,612,596
_RS11670
Position (kb)
2610
2611
2612 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2610.479 kb on + strand, within ABZR86_RS11655 at 2610.611 kb on + strand, within ABZR86_RS11655 at 2610.612 kb on - strand, within ABZR86_RS11655 at 2611.121 kb on + strand, within ABZR86_RS11660 at 2611.122 kb on - strand, within ABZR86_RS11660 at 2611.122 kb on - strand, within ABZR86_RS11660 at 2611.122 kb on - strand, within ABZR86_RS11660 at 2611.122 kb on - strand, within ABZR86_RS11660 at 2611.122 kb on - strand, within ABZR86_RS11660 at 2611.129 kb on + strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.130 kb on - strand, within ABZR86_RS11660 at 2611.262 kb on + strand at 2611.262 kb on + strand at 2611.262 kb on + strand at 2611.263 kb on - strand at 2611.263 kb on - strand at 2611.490 kb on - strand, within ABZR86_RS11665 at 2611.490 kb on - strand, within ABZR86_RS11665 at 2611.490 kb on - strand, within ABZR86_RS11665 at 2611.490 kb on - strand, within ABZR86_RS11665 at 2611.523 kb on + strand, within ABZR86_RS11665 at 2611.523 kb on + strand, within ABZR86_RS11665 at 2611.523 kb on + strand, within ABZR86_RS11665 at 2611.523 kb on + strand, within ABZR86_RS11665 at 2611.524 kb on - strand, within ABZR86_RS11665 at 2611.524 kb on - strand, within ABZR86_RS11665 at 2611.683 kb on + strand at 2611.706 kb on + strand at 2611.856 kb on + strand, within ABZR86_RS11670 at 2611.856 kb on + strand, within ABZR86_RS11670 at 2611.856 kb on + strand, within ABZR86_RS11670 at 2611.856 kb on + strand, within ABZR86_RS11670 at 2611.857 kb on - strand, within ABZR86_RS11670 at 2611.857 kb on - strand, within ABZR86_RS11670 at 2611.857 kb on - strand, within ABZR86_RS11670 at 2611.905 kb on - strand, within ABZR86_RS11670 at 2611.976 kb on + strand, within ABZR86_RS11670 at 2612.009 kb on + strand, within ABZR86_RS11670 at 2612.010 kb on - strand, within ABZR86_RS11670 at 2612.010 kb on - strand, within ABZR86_RS11670 at 2612.052 kb on - strand, within ABZR86_RS11670 at 2612.084 kb on + strand, within ABZR86_RS11670 at 2612.085 kb on - strand, within ABZR86_RS11670
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,610,479 + ABZR86_RS11655 0.75 -2.1 2,610,611 + ABZR86_RS11655 0.83 +0.1 2,610,612 - ABZR86_RS11655 0.83 -1.2 2,611,121 + ABZR86_RS11660 0.57 -0.1 2,611,122 - ABZR86_RS11660 0.57 +0.2 2,611,122 - ABZR86_RS11660 0.57 -0.3 2,611,122 - ABZR86_RS11660 0.57 +0.7 2,611,122 - ABZR86_RS11660 0.57 +0.4 2,611,122 - ABZR86_RS11660 0.57 +0.5 2,611,129 + ABZR86_RS11660 0.59 +0.1 2,611,130 - ABZR86_RS11660 0.59 -1.2 2,611,130 - ABZR86_RS11660 0.59 +1.2 2,611,130 - ABZR86_RS11660 0.59 +0.6 2,611,130 - ABZR86_RS11660 0.59 -0.6 2,611,130 - ABZR86_RS11660 0.59 -0.9 2,611,130 - ABZR86_RS11660 0.59 -0.5 2,611,130 - ABZR86_RS11660 0.59 +0.4 2,611,262 + -0.6 2,611,262 + +1.2 2,611,262 + -0.1 2,611,263 - +1.8 2,611,263 - -2.0 2,611,490 - ABZR86_RS11665 0.50 -0.8 2,611,490 - ABZR86_RS11665 0.50 -0.9 2,611,490 - ABZR86_RS11665 0.50 -0.9 2,611,490 - ABZR86_RS11665 0.50 -0.6 2,611,523 + ABZR86_RS11665 0.62 +1.8 2,611,523 + ABZR86_RS11665 0.62 +0.7 2,611,523 + ABZR86_RS11665 0.62 +0.9 2,611,523 + ABZR86_RS11665 0.62 -1.0 2,611,524 - ABZR86_RS11665 0.62 -1.6 2,611,524 - ABZR86_RS11665 0.62 -2.9 2,611,683 + -0.0 2,611,706 + -1.4 2,611,856 + ABZR86_RS11670 0.14 +0.8 2,611,856 + ABZR86_RS11670 0.14 -0.0 2,611,856 + ABZR86_RS11670 0.14 -0.5 2,611,856 + ABZR86_RS11670 0.14 -0.2 2,611,857 - ABZR86_RS11670 0.14 +0.0 2,611,857 - ABZR86_RS11670 0.14 -1.1 2,611,857 - ABZR86_RS11670 0.14 +0.4 2,611,905 - ABZR86_RS11670 0.19 +2.7 2,611,976 + ABZR86_RS11670 0.28 +0.5 2,612,009 + ABZR86_RS11670 0.31 +0.0 2,612,010 - ABZR86_RS11670 0.32 +0.6 2,612,010 - ABZR86_RS11670 0.32 +0.9 2,612,052 - ABZR86_RS11670 0.36 +2.1 2,612,084 + ABZR86_RS11670 0.40 +0.9 2,612,085 - ABZR86_RS11670 0.40 -0.3
Or see this region's nucleotide sequence