Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10765 and ABZR86_RS10770 are separated by 244 nucleotides ABZR86_RS10770 and ABZR86_RS10775 are separated by 70 nucleotides ABZR86_RS10775 and ABZR86_RS10780 are separated by 179 nucleotides ABZR86_RS10780 and ABZR86_RS10785 are separated by 72 nucleotides
ABZR86_RS10765: ABZR86_RS10765 - hypothetical protein, at 2,394,321 to 2,394,785
_RS10765
ABZR86_RS10770: ABZR86_RS10770 - transcriptional regulator, at 2,395,030 to 2,395,353
_RS10770
ABZR86_RS10775: ABZR86_RS10775 - RcnB family protein, at 2,395,424 to 2,395,786
_RS10775
ABZR86_RS10780: ABZR86_RS10780 - tRNA-Lys, at 2,395,966 to 2,396,041
_RS10780
ABZR86_RS10785: ABZR86_RS10785 - 7-cyano-7-deazaguanine synthase QueC, at 2,396,114 to 2,396,809
_RS10785
Position (kb)
2395
2396 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.704 kb on - strand, within ABZR86_RS10765 at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.926 kb on - strand at 2394.983 kb on + strand at 2394.984 kb on - strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.005 kb on - strand at 2395.005 kb on - strand at 2395.241 kb on - strand, within ABZR86_RS10770 at 2395.271 kb on + strand, within ABZR86_RS10770 at 2395.506 kb on + strand, within ABZR86_RS10775 at 2395.506 kb on + strand, within ABZR86_RS10775 at 2395.506 kb on + strand, within ABZR86_RS10775 at 2395.539 kb on + strand, within ABZR86_RS10775 at 2395.539 kb on + strand, within ABZR86_RS10775 at 2395.549 kb on - strand, within ABZR86_RS10775 at 2395.549 kb on - strand, within ABZR86_RS10775 at 2395.560 kb on + strand, within ABZR86_RS10775 at 2395.560 kb on + strand, within ABZR86_RS10775 at 2395.560 kb on + strand, within ABZR86_RS10775 at 2395.561 kb on - strand, within ABZR86_RS10775 at 2395.561 kb on - strand, within ABZR86_RS10775 at 2395.561 kb on - strand, within ABZR86_RS10775 at 2395.561 kb on - strand, within ABZR86_RS10775 at 2395.561 kb on - strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.563 kb on + strand, within ABZR86_RS10775 at 2395.564 kb on - strand, within ABZR86_RS10775 at 2395.564 kb on - strand, within ABZR86_RS10775 at 2395.564 kb on - strand, within ABZR86_RS10775 at 2395.575 kb on + strand, within ABZR86_RS10775 at 2395.575 kb on + strand, within ABZR86_RS10775 at 2395.575 kb on + strand, within ABZR86_RS10775 at 2395.576 kb on - strand, within ABZR86_RS10775 at 2395.578 kb on + strand, within ABZR86_RS10775 at 2395.578 kb on + strand, within ABZR86_RS10775 at 2395.579 kb on - strand, within ABZR86_RS10775 at 2395.579 kb on - strand, within ABZR86_RS10775 at 2395.608 kb on + strand, within ABZR86_RS10775 at 2395.609 kb on - strand, within ABZR86_RS10775 at 2395.775 kb on + strand at 2395.776 kb on - strand at 2395.851 kb on + strand at 2395.851 kb on + strand at 2395.851 kb on + strand at 2395.851 kb on + strand at 2395.852 kb on - strand at 2396.081 kb on - strand at 2396.121 kb on + strand at 2396.221 kb on - strand, within ABZR86_RS10785 at 2396.221 kb on - strand, within ABZR86_RS10785 at 2396.438 kb on - strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.508 kb on + strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785 at 2396.509 kb on - strand, within ABZR86_RS10785
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,394,656 + ABZR86_RS10765 0.72 -0.4 2,394,656 + ABZR86_RS10765 0.72 -1.6 2,394,656 + ABZR86_RS10765 0.72 -0.1 2,394,656 + ABZR86_RS10765 0.72 +0.5 2,394,656 + ABZR86_RS10765 0.72 +2.0 2,394,656 + ABZR86_RS10765 0.72 -0.8 2,394,656 + ABZR86_RS10765 0.72 -3.8 2,394,657 - ABZR86_RS10765 0.72 +1.5 2,394,657 - ABZR86_RS10765 0.72 -0.0 2,394,657 - ABZR86_RS10765 0.72 +0.1 2,394,703 + ABZR86_RS10765 0.82 +1.5 2,394,703 + ABZR86_RS10765 0.82 -1.4 2,394,704 - ABZR86_RS10765 0.82 -1.5 2,394,925 + -1.2 2,394,925 + +0.9 2,394,925 + -1.2 2,394,925 + +1.1 2,394,926 - -1.6 2,394,983 + +1.5 2,394,984 - -1.6 2,395,004 + +1.3 2,395,004 + +0.7 2,395,004 + +1.2 2,395,004 + +1.1 2,395,004 + -0.4 2,395,004 + -0.7 2,395,004 + +0.4 2,395,005 - -1.3 2,395,005 - +0.5 2,395,241 - ABZR86_RS10770 0.65 +0.6 2,395,271 + ABZR86_RS10770 0.74 -0.7 2,395,506 + ABZR86_RS10775 0.23 -1.3 2,395,506 + ABZR86_RS10775 0.23 +0.5 2,395,506 + ABZR86_RS10775 0.23 -4.2 2,395,539 + ABZR86_RS10775 0.32 -0.3 2,395,539 + ABZR86_RS10775 0.32 +0.9 2,395,549 - ABZR86_RS10775 0.34 -0.1 2,395,549 - ABZR86_RS10775 0.34 -0.2 2,395,560 + ABZR86_RS10775 0.37 +0.9 2,395,560 + ABZR86_RS10775 0.37 -0.3 2,395,560 + ABZR86_RS10775 0.37 +0.7 2,395,561 - ABZR86_RS10775 0.38 +0.5 2,395,561 - ABZR86_RS10775 0.38 -0.2 2,395,561 - ABZR86_RS10775 0.38 -0.6 2,395,561 - ABZR86_RS10775 0.38 +0.3 2,395,561 - ABZR86_RS10775 0.38 -2.1 2,395,563 + ABZR86_RS10775 0.38 +0.1 2,395,563 + ABZR86_RS10775 0.38 +0.2 2,395,563 + ABZR86_RS10775 0.38 +0.5 2,395,563 + ABZR86_RS10775 0.38 -0.4 2,395,563 + ABZR86_RS10775 0.38 -1.6 2,395,563 + ABZR86_RS10775 0.38 +0.4 2,395,563 + ABZR86_RS10775 0.38 +0.5 2,395,564 - ABZR86_RS10775 0.39 +0.6 2,395,564 - ABZR86_RS10775 0.39 +0.6 2,395,564 - ABZR86_RS10775 0.39 -0.9 2,395,575 + ABZR86_RS10775 0.42 +0.7 2,395,575 + ABZR86_RS10775 0.42 -2.2 2,395,575 + ABZR86_RS10775 0.42 +1.3 2,395,576 - ABZR86_RS10775 0.42 -0.5 2,395,578 + ABZR86_RS10775 0.42 +0.1 2,395,578 + ABZR86_RS10775 0.42 +1.9 2,395,579 - ABZR86_RS10775 0.43 +0.8 2,395,579 - ABZR86_RS10775 0.43 +0.3 2,395,608 + ABZR86_RS10775 0.51 +0.5 2,395,609 - ABZR86_RS10775 0.51 +0.4 2,395,775 + -2.0 2,395,776 - -1.3 2,395,851 + -2.3 2,395,851 + -0.6 2,395,851 + +0.4 2,395,851 + +1.1 2,395,852 - -0.1 2,396,081 - +1.3 2,396,121 + +0.8 2,396,221 - ABZR86_RS10785 0.15 -0.2 2,396,221 - ABZR86_RS10785 0.15 +0.3 2,396,438 - ABZR86_RS10785 0.47 -2.2 2,396,508 + ABZR86_RS10785 0.57 -3.5 2,396,508 + ABZR86_RS10785 0.57 +0.6 2,396,508 + ABZR86_RS10785 0.57 -0.1 2,396,508 + ABZR86_RS10785 0.57 -1.3 2,396,508 + ABZR86_RS10785 0.57 -1.0 2,396,508 + ABZR86_RS10785 0.57 +0.7 2,396,508 + ABZR86_RS10785 0.57 +0.7 2,396,508 + ABZR86_RS10785 0.57 +0.2 2,396,508 + ABZR86_RS10785 0.57 -0.4 2,396,509 - ABZR86_RS10785 0.57 +1.1 2,396,509 - ABZR86_RS10785 0.57 +0.3 2,396,509 - ABZR86_RS10785 0.57 -0.6 2,396,509 - ABZR86_RS10785 0.57 -0.6 2,396,509 - ABZR86_RS10785 0.57 -1.3 2,396,509 - ABZR86_RS10785 0.57 +0.2 2,396,509 - ABZR86_RS10785 0.57 -2.8 2,396,509 - ABZR86_RS10785 0.57 +0.4 2,396,509 - ABZR86_RS10785 0.57 +0.1 2,396,509 - ABZR86_RS10785 0.57 -1.2 2,396,509 - ABZR86_RS10785 0.57 -1.5 2,396,509 - ABZR86_RS10785 0.57 -1.3
Or see this region's nucleotide sequence