Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10325

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,285,459	-		ABZR86_RS10315	0.61	-0.2
2,285,548	-		ABZR86_RS10315	0.78	+0.6
2,285,591	+		ABZR86_RS10315	0.86	-2.3
2,285,690	+				-0.4
2,285,774	+		ABZR86_RS10320	0.15	-3.1
2,285,817	+		ABZR86_RS10320	0.21	+1.9
2,285,820	+		ABZR86_RS10320	0.22	-1.3
2,285,829	+		ABZR86_RS10320	0.23	-0.1
2,285,925	+		ABZR86_RS10320	0.36	+2.8
2,285,926	-		ABZR86_RS10320	0.37	+0.9
2,285,926	-		ABZR86_RS10320	0.37	-0.4
2,285,930	+		ABZR86_RS10320	0.37	+2.5
2,285,930	+		ABZR86_RS10320	0.37	+0.2
2,285,930	+		ABZR86_RS10320	0.37	-3.0
2,285,931	-		ABZR86_RS10320	0.37	+0.3
2,285,931	-		ABZR86_RS10320	0.37	+0.9
2,285,940	+		ABZR86_RS10320	0.38	-1.1
2,285,960	-		ABZR86_RS10320	0.41	-0.7
2,286,044	+		ABZR86_RS10320	0.53	+0.2
2,286,081	+		ABZR86_RS10320	0.58	+1.9
2,286,081	+		ABZR86_RS10320	0.58	-0.3
2,286,082	-		ABZR86_RS10320	0.58	-0.9
2,286,082	-		ABZR86_RS10320	0.58	+1.8
2,286,208	+		ABZR86_RS10320	0.76	+0.1
2,286,209	-		ABZR86_RS10320	0.76	-1.2
2,286,212	+		ABZR86_RS10320	0.76	-0.2
2,286,212	+		ABZR86_RS10320	0.76	+0.8
2,286,213	-		ABZR86_RS10320	0.76	-1.8
2,286,213	-		ABZR86_RS10320	0.76	+0.7
2,286,213	-		ABZR86_RS10320	0.76	-0.5
2,286,218	+		ABZR86_RS10320	0.77	+1.0
2,286,218	+		ABZR86_RS10320	0.77	+0.4
2,286,218	+		ABZR86_RS10320	0.77	+0.2
2,286,219	-		ABZR86_RS10320	0.77	+1.2
2,286,219	-		ABZR86_RS10320	0.77	-1.3
2,286,219	-		ABZR86_RS10320	0.77	-0.8
2,286,219	-		ABZR86_RS10320	0.77	+0.2
2,286,219	-		ABZR86_RS10320	0.77	+1.1
2,286,219	-		ABZR86_RS10320	0.77	+0.6
2,286,219	-		ABZR86_RS10320	0.77	-1.2
2,286,263	+		ABZR86_RS10320	0.83	+1.0
2,286,263	+		ABZR86_RS10320	0.83	+0.9
2,286,263	+		ABZR86_RS10320	0.83	+1.3
2,286,264	-		ABZR86_RS10320	0.83	+0.6
2,286,285	-		ABZR86_RS10320	0.86	+0.2
2,286,302	+		ABZR86_RS10320	0.89	-1.3
2,286,302	+		ABZR86_RS10320	0.89	-4.0
2,286,302	+		ABZR86_RS10320	0.89	+0.2
2,286,326	+				-1.8
2,286,327	-				+1.8
2,286,327	-				-0.1
2,286,329	+				-1.3
2,286,330	-				+1.6
2,286,330	-				-1.1
2,286,404	+				-1.6
2,286,404	+				-1.8
2,286,405	-				+2.5
2,286,405	-				+1.3
2,286,410	+				+0.8
2,286,411	-				-2.6
2,286,479	+				-0.3
2,286,479	+				-3.3
2,286,480	-				-2.3
2,286,545	+				-0.1
2,286,545	+				+0.7
2,286,546	-				-0.7
2,286,567	-				+0.2
2,286,596	+				-0.2
2,286,597	-				+0.6
2,286,653	+				+0.6
2,286,654	-				+0.2
2,286,659	+		ABZR86_RS10325	0.10	+0.6
2,286,659	+		ABZR86_RS10325	0.10	-0.1
2,286,660	-		ABZR86_RS10325	0.10	+0.4
2,286,717	-		ABZR86_RS10325	0.12	-1.7
2,286,717	-		ABZR86_RS10325	0.12	+0.4
2,286,890	+		ABZR86_RS10325	0.20	+0.3
2,286,891	-		ABZR86_RS10325	0.20	+0.3
2,286,891	-		ABZR86_RS10325	0.20	+0.7
2,286,956	+		ABZR86_RS10325	0.22	+1.8
2,286,957	-		ABZR86_RS10325	0.22	-2.1
2,286,957	-		ABZR86_RS10325	0.22	-2.0
2,286,957	-		ABZR86_RS10325	0.22	+0.8
2,286,962	+		ABZR86_RS10325	0.22	-0.2
2,286,962	+		ABZR86_RS10325	0.22	-0.4
2,286,962	+		ABZR86_RS10325	0.22	-1.7
2,286,962	+		ABZR86_RS10325	0.22	-1.0
2,286,962	+		ABZR86_RS10325	0.22	-1.2
2,286,963	-		ABZR86_RS10325	0.22	-2.2
2,287,076	+		ABZR86_RS10325	0.27	+1.6
2,287,076	+		ABZR86_RS10325	0.27	-1.6
2,287,077	-		ABZR86_RS10325	0.27	-0.5
2,287,077	-		ABZR86_RS10325	0.27	+0.4
2,287,077	-		ABZR86_RS10325	0.27	+0.5
2,287,077	-		ABZR86_RS10325	0.27	+0.9
2,287,088	+		ABZR86_RS10325	0.28	+1.2
2,287,088	+		ABZR86_RS10325	0.28	-0.3
2,287,151	+		ABZR86_RS10325	0.30	-1.1
2,287,152	-		ABZR86_RS10325	0.30	-0.4
2,287,152	-		ABZR86_RS10325	0.30	+1.4
2,287,152	-		ABZR86_RS10325	0.30	-0.6
2,287,272	+		ABZR86_RS10325	0.35	-1.6
2,287,273	-		ABZR86_RS10325	0.35	+0.8
2,287,304	+		ABZR86_RS10325	0.36	+0.9
2,287,304	+		ABZR86_RS10325	0.36	+0.1
2,287,305	-		ABZR86_RS10325	0.36	-0.4
2,287,305	-		ABZR86_RS10325	0.36	-0.3
2,287,310	+		ABZR86_RS10325	0.37	+0.5
2,287,310	+		ABZR86_RS10325	0.37	-1.8
2,287,310	+		ABZR86_RS10325	0.37	+2.8
2,287,310	+		ABZR86_RS10325	0.37	+1.9
2,287,310	+		ABZR86_RS10325	0.37	-3.1
2,287,311	-		ABZR86_RS10325	0.37	+0.4
2,287,382	+		ABZR86_RS10325	0.39	+3.0
2,287,382	+		ABZR86_RS10325	0.39	-0.1
2,287,383	-		ABZR86_RS10325	0.39	-0.8
2,287,505	+		ABZR86_RS10325	0.44	+1.1
2,287,505	+		ABZR86_RS10325	0.44	-1.1
2,287,506	-		ABZR86_RS10325	0.44	-0.2
2,287,506	-		ABZR86_RS10325	0.44	-0.3
2,287,538	+		ABZR86_RS10325	0.46	-2.1
2,287,538	+		ABZR86_RS10325	0.46	+1.3
2,287,538	+		ABZR86_RS10325	0.46	+1.0
2,287,538	+		ABZR86_RS10325	0.46	+0.8
2,287,538	+		ABZR86_RS10325	0.46	+0.2
2,287,539	-		ABZR86_RS10325	0.46	-0.6
2,287,539	-		ABZR86_RS10325	0.46	+0.8
2,287,539	-		ABZR86_RS10325	0.46	-2.5
2,287,539	-		ABZR86_RS10325	0.46	+0.4
2,287,539	-		ABZR86_RS10325	0.46	-0.6
2,287,601	+		ABZR86_RS10325	0.48	-0.2
2,287,601	+		ABZR86_RS10325	0.48	+0.3
2,287,654	+		ABZR86_RS10325	0.50	-2.2
2,287,670	+		ABZR86_RS10325	0.51	+0.0
2,287,670	+		ABZR86_RS10325	0.51	+0.4
2,287,678	-		ABZR86_RS10325	0.51	-2.2
2,287,678	-		ABZR86_RS10325	0.51	+0.7
2,287,708	+		ABZR86_RS10325	0.53	-0.4
2,287,708	+		ABZR86_RS10325	0.53	+0.6
2,287,709	-		ABZR86_RS10325	0.53	-1.0
2,287,709	-		ABZR86_RS10325	0.53	-1.1
2,287,709	-		ABZR86_RS10325	0.53	-2.6
2,287,709	-		ABZR86_RS10325	0.53	+0.5
2,287,781	+		ABZR86_RS10325	0.56	-0.2
2,287,782	-		ABZR86_RS10325	0.56	+1.0
2,287,782	-		ABZR86_RS10325	0.56	+0.7
2,287,821	-		ABZR86_RS10325	0.57	-3.2
2,287,883	+		ABZR86_RS10325	0.60	-2.1
2,287,883	+		ABZR86_RS10325	0.60	+0.7
2,287,883	+		ABZR86_RS10325	0.60	-1.4
2,287,883	+		ABZR86_RS10325	0.60	+0.8
2,287,884	-		ABZR86_RS10325	0.60	-1.2
2,287,884	-		ABZR86_RS10325	0.60	+0.9
2,287,888	-		ABZR86_RS10325	0.60	+1.6
2,287,961	+		ABZR86_RS10325	0.63	-1.2
2,287,962	-		ABZR86_RS10325	0.63	-0.7
2,288,045	+		ABZR86_RS10325	0.66	-2.4
2,288,102	+		ABZR86_RS10325	0.69	-0.1
2,288,103	-		ABZR86_RS10325	0.69	+2.2
2,288,103	-		ABZR86_RS10325	0.69	+0.2
2,288,108	+		ABZR86_RS10325	0.69	+0.1
2,288,108	+		ABZR86_RS10325	0.69	-0.4
2,288,109	-		ABZR86_RS10325	0.69	-2.4
2,288,109	-		ABZR86_RS10325	0.69	-0.1
2,288,157	-		ABZR86_RS10325	0.71	-2.0
2,288,165	+		ABZR86_RS10325	0.71	+0.4
2,288,255	+		ABZR86_RS10325	0.75	+0.0
2,288,255	+		ABZR86_RS10325	0.75	-0.2
2,288,256	-		ABZR86_RS10325	0.75	-0.4
2,288,319	-		ABZR86_RS10325	0.77	-1.0
2,288,363	+		ABZR86_RS10325	0.79	-0.5
2,288,400	+		ABZR86_RS10325	0.81	+0.5
2,288,430	-		ABZR86_RS10325	0.82	-0.4
2,288,430	-		ABZR86_RS10325	0.82	-0.7
2,288,430	-		ABZR86_RS10325	0.82	-0.7
2,288,432	+		ABZR86_RS10325	0.82	+0.2
2,288,432	+		ABZR86_RS10325	0.82	+0.4
2,288,432	+		ABZR86_RS10325	0.82	+0.1
2,288,432	+		ABZR86_RS10325	0.82	+0.2
2,288,433	-		ABZR86_RS10325	0.82	-0.0
2,288,433	-		ABZR86_RS10325	0.82	+0.8
2,288,531	+		ABZR86_RS10325	0.86	+0.2
2,288,532	-		ABZR86_RS10325	0.86	+0.0
2,288,532	-		ABZR86_RS10325	0.86	-1.4
2,288,536	-		ABZR86_RS10325	0.86	+0.6
2,288,536	-		ABZR86_RS10325	0.86	+1.0
2,288,536	-		ABZR86_RS10325	0.86	+0.9
2,288,536	-		ABZR86_RS10325	0.86	-0.9
2,288,537	+		ABZR86_RS10325	0.86	-1.0
2,288,537	+		ABZR86_RS10325	0.86	-0.6
2,288,537	+		ABZR86_RS10325	0.86	+1.0
2,288,538	-		ABZR86_RS10325	0.86	+1.3
2,288,538	-		ABZR86_RS10325	0.86	+1.4
2,288,538	-		ABZR86_RS10325	0.86	-1.1
2,288,648	+				-1.3
2,288,649	-				-0.8
2,288,661	+				+0.7
2,288,661	+				-0.3
2,288,810	+				+0.3
2,288,867	+				-3.3
2,288,867	+				+0.9
2,288,867	+				+1.4
2,288,868	-				-0.7
2,288,868	-				+0.4
2,288,953	+				+0.3
2,288,953	+				+3.4
2,288,953	+				+0.5
2,288,954	-				-1.0
2,288,954	-				+0.0
2,288,955	+				-0.2
2,288,956	-				-0.4
2,288,956	-				-0.0
2,288,956	-				+0.8
2,288,996	-				+0.8
2,289,006	+				-0.7
2,289,075	+		ABZR86_RS10330	0.13	-0.1
2,289,076	-		ABZR86_RS10330	0.13	-1.0
2,289,090	+		ABZR86_RS10330	0.14	-0.2
2,289,091	-		ABZR86_RS10330	0.14	+0.1
2,289,091	-		ABZR86_RS10330	0.14	-0.1
2,289,091	-		ABZR86_RS10330	0.14	+0.5
2,289,151	-		ABZR86_RS10330	0.18	-0.1
2,289,157	-		ABZR86_RS10330	0.18	+2.7
2,289,180	+		ABZR86_RS10330	0.20	-0.2
2,289,276	+		ABZR86_RS10330	0.26	-0.0
2,289,354	+		ABZR86_RS10330	0.30	-0.4
2,289,355	-		ABZR86_RS10330	0.31	+0.1
2,289,355	-		ABZR86_RS10330	0.31	-0.1
2,289,370	+		ABZR86_RS10330	0.31	-0.4
2,289,370	+		ABZR86_RS10330	0.31	+0.8
2,289,370	+		ABZR86_RS10330	0.31	+0.3
2,289,370	+		ABZR86_RS10330	0.31	-0.2
2,289,371	-		ABZR86_RS10330	0.32	+1.1
2,289,371	-		ABZR86_RS10330	0.32	+1.9
2,289,371	-		ABZR86_RS10330	0.32	+1.2
2,289,373	-		ABZR86_RS10330	0.32	-1.1
2,289,373	-		ABZR86_RS10330	0.32	-0.8
2,289,506	+		ABZR86_RS10330	0.40	+0.5
2,289,532	-		ABZR86_RS10330	0.42	-1.2
2,289,532	-		ABZR86_RS10330	0.42	-1.5
2,289,532	-		ABZR86_RS10330	0.42	+1.1
2,289,534	+		ABZR86_RS10330	0.42	+1.4
2,289,534	+		ABZR86_RS10330	0.42	+0.1
2,289,534	+		ABZR86_RS10330	0.42	-1.3
2,289,534	+		ABZR86_RS10330	0.42	+1.4
2,289,534	+		ABZR86_RS10330	0.42	-0.8
2,289,535	-		ABZR86_RS10330	0.42	+0.2
2,289,535	-		ABZR86_RS10330	0.42	+1.5
2,289,535	-		ABZR86_RS10330	0.42	-2.8
2,289,535	-		ABZR86_RS10330	0.42	+1.0
2,289,613	+		ABZR86_RS10330	0.47	+0.8
2,289,613	+		ABZR86_RS10330	0.47	+0.1
2,289,613	+		ABZR86_RS10330	0.47	-0.1
2,289,614	-		ABZR86_RS10330	0.47	-2.2
2,289,614	-		ABZR86_RS10330	0.47	-0.6
2,289,769	-		ABZR86_RS10330	0.56	+0.4