Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08140 and ABZR86_RS08145 are separated by 138 nucleotides ABZR86_RS08145 and ABZR86_RS08150 are separated by 96 nucleotides ABZR86_RS08150 and ABZR86_RS08155 overlap by 4 nucleotides
ABZR86_RS08140: ABZR86_RS08140 - iron-sulfur cluster carrier protein ApbC, at 1,815,175 to 1,816,269
_RS08140
ABZR86_RS08145: ABZR86_RS08145 - DUF2147 domain-containing protein, at 1,816,408 to 1,816,848
_RS08145
ABZR86_RS08150: ABZR86_RS08150 - DeoR/GlpR family DNA-binding transcription regulator, at 1,816,945 to 1,817,757
_RS08150
ABZR86_RS08155: ABZR86_RS08155 - HAD family hydrolase, at 1,817,754 to 1,818,392
_RS08155
Position (kb)
1816
1817 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1816.304 kb on - strand at 1816.304 kb on - strand at 1816.304 kb on - strand at 1816.383 kb on + strand at 1816.383 kb on + strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.461 kb on + strand, within ABZR86_RS08145 at 1816.741 kb on + strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.795 kb on + strand, within ABZR86_RS08145 at 1816.796 kb on - strand, within ABZR86_RS08145 at 1816.847 kb on - strand at 1816.856 kb on + strand at 1816.856 kb on + strand at 1816.857 kb on - strand at 1816.872 kb on + strand at 1816.872 kb on + strand at 1816.879 kb on + strand at 1816.880 kb on - strand at 1816.893 kb on + strand at 1816.893 kb on + strand at 1816.893 kb on + strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.946 kb on + strand at 1816.947 kb on - strand at 1816.947 kb on - strand at 1816.998 kb on - strand at 1817.626 kb on + strand, within ABZR86_RS08150
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,816,304 - -1.1 1,816,304 - -0.6 1,816,304 - +0.7 1,816,383 + +0.4 1,816,383 + -3.8 1,816,384 - +0.2 1,816,384 - -0.5 1,816,384 - -0.5 1,816,384 - +0.6 1,816,461 + ABZR86_RS08145 0.12 +0.2 1,816,741 + ABZR86_RS08145 0.76 -0.0 1,816,742 - ABZR86_RS08145 0.76 +0.2 1,816,742 - ABZR86_RS08145 0.76 +1.3 1,816,742 - ABZR86_RS08145 0.76 +0.3 1,816,795 + ABZR86_RS08145 0.88 -0.7 1,816,796 - ABZR86_RS08145 0.88 -0.2 1,816,847 - +0.9 1,816,856 + +0.0 1,816,856 + +0.1 1,816,857 - -1.1 1,816,872 + +0.8 1,816,872 + -0.9 1,816,879 + +0.7 1,816,880 - -1.7 1,816,893 + +0.8 1,816,893 + -1.0 1,816,893 + +0.2 1,816,894 - +1.8 1,816,894 - -0.7 1,816,894 - +0.6 1,816,894 - +0.4 1,816,894 - +0.6 1,816,946 + +0.2 1,816,947 - +1.8 1,816,947 - +1.3 1,816,998 - -1.9 1,817,626 + ABZR86_RS08150 0.84 +1.4
Or see this region's nucleotide sequence