Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06465 and ABZR86_RS06470 are separated by 75 nucleotides ABZR86_RS06470 and ABZR86_RS06475 are separated by 25 nucleotides ABZR86_RS06475 and ABZR86_RS06480 are separated by 596 nucleotides
ABZR86_RS06465: ABZR86_RS06465 - homoserine O-acetyltransferase, at 1,434,444 to 1,435,550
_RS06465
ABZR86_RS06470: ABZR86_RS06470 - cysteine dioxygenase family protein, at 1,435,626 to 1,436,210
_RS06470
ABZR86_RS06475: ABZR86_RS06475 - tRNA-Leu, at 1,436,236 to 1,436,321
_RS06475
ABZR86_RS06480: ABZR86_RS06480 - SIR2 family protein, at 1,436,918 to 1,438,621
_RS06480
Position (kb)
1436
1437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1435.587 kb on - strand at 1435.587 kb on - strand at 1435.631 kb on + strand at 1435.632 kb on - strand at 1435.632 kb on - strand at 1435.839 kb on + strand, within ABZR86_RS06470 at 1435.839 kb on + strand, within ABZR86_RS06470 at 1435.840 kb on - strand, within ABZR86_RS06470 at 1435.840 kb on - strand, within ABZR86_RS06470 at 1435.840 kb on - strand, within ABZR86_RS06470 at 1435.942 kb on + strand, within ABZR86_RS06470 at 1435.942 kb on + strand, within ABZR86_RS06470 at 1435.950 kb on + strand, within ABZR86_RS06470 at 1435.951 kb on - strand, within ABZR86_RS06470 at 1436.052 kb on + strand, within ABZR86_RS06470 at 1436.052 kb on + strand, within ABZR86_RS06470 at 1436.053 kb on - strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.106 kb on + strand, within ABZR86_RS06470 at 1436.107 kb on - strand, within ABZR86_RS06470 at 1436.107 kb on - strand, within ABZR86_RS06470 at 1436.107 kb on - strand, within ABZR86_RS06470 at 1436.107 kb on - strand, within ABZR86_RS06470 at 1436.166 kb on + strand at 1436.166 kb on + strand at 1436.167 kb on - strand at 1436.167 kb on - strand at 1436.327 kb on + strand at 1436.345 kb on + strand at 1436.345 kb on + strand at 1436.345 kb on + strand at 1436.346 kb on - strand at 1436.379 kb on + strand at 1436.380 kb on - strand at 1436.380 kb on - strand at 1436.394 kb on - strand at 1436.394 kb on - strand at 1436.394 kb on - strand at 1436.399 kb on + strand at 1436.399 kb on + strand at 1436.400 kb on - strand at 1436.410 kb on + strand at 1436.553 kb on + strand at 1436.554 kb on - strand at 1436.554 kb on - strand at 1436.641 kb on + strand at 1436.641 kb on + strand at 1436.641 kb on + strand at 1436.641 kb on + strand at 1436.641 kb on + strand at 1436.641 kb on + strand at 1436.642 kb on - strand at 1436.642 kb on - strand at 1436.642 kb on - strand at 1436.659 kb on + strand at 1436.659 kb on + strand at 1436.660 kb on - strand at 1436.726 kb on + strand at 1436.727 kb on - strand at 1436.814 kb on + strand at 1436.814 kb on + strand at 1436.822 kb on + strand at 1436.826 kb on + strand at 1436.826 kb on + strand at 1436.826 kb on + strand at 1436.826 kb on + strand at 1436.827 kb on - strand at 1436.836 kb on + strand at 1436.880 kb on + strand at 1436.880 kb on + strand at 1436.880 kb on + strand at 1436.880 kb on + strand at 1436.881 kb on - strand at 1436.883 kb on + strand at 1436.884 kb on - strand at 1436.894 kb on + strand at 1436.894 kb on + strand at 1436.895 kb on - strand at 1436.898 kb on + strand at 1436.923 kb on + strand at 1436.923 kb on + strand at 1436.924 kb on - strand at 1436.924 kb on - strand at 1436.924 kb on - strand at 1436.936 kb on - strand at 1436.936 kb on - strand at 1436.944 kb on + strand at 1437.011 kb on + strand at 1437.011 kb on + strand at 1437.011 kb on + strand at 1437.012 kb on - strand at 1437.124 kb on + strand, within ABZR86_RS06480 at 1437.124 kb on + strand, within ABZR86_RS06480 at 1437.124 kb on + strand, within ABZR86_RS06480 at 1437.125 kb on - strand, within ABZR86_RS06480 at 1437.125 kb on - strand, within ABZR86_RS06480 at 1437.125 kb on - strand, within ABZR86_RS06480 at 1437.125 kb on - strand, within ABZR86_RS06480 at 1437.128 kb on + strand, within ABZR86_RS06480 at 1437.234 kb on + strand, within ABZR86_RS06480 at 1437.235 kb on - strand, within ABZR86_RS06480 at 1437.283 kb on + strand, within ABZR86_RS06480 at 1437.283 kb on + strand, within ABZR86_RS06480 at 1437.284 kb on - strand, within ABZR86_RS06480 at 1437.305 kb on + strand, within ABZR86_RS06480 at 1437.305 kb on + strand, within ABZR86_RS06480 at 1437.305 kb on + strand, within ABZR86_RS06480
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,435,587 - -0.6 1,435,587 - -0.2 1,435,631 + +2.2 1,435,632 - +0.7 1,435,632 - -0.2 1,435,839 + ABZR86_RS06470 0.36 +0.4 1,435,839 + ABZR86_RS06470 0.36 +2.0 1,435,840 - ABZR86_RS06470 0.37 -1.5 1,435,840 - ABZR86_RS06470 0.37 -2.1 1,435,840 - ABZR86_RS06470 0.37 -0.8 1,435,942 + ABZR86_RS06470 0.54 +0.8 1,435,942 + ABZR86_RS06470 0.54 +1.0 1,435,950 + ABZR86_RS06470 0.55 +0.5 1,435,951 - ABZR86_RS06470 0.56 +0.9 1,436,052 + ABZR86_RS06470 0.73 +0.0 1,436,052 + ABZR86_RS06470 0.73 -1.5 1,436,053 - ABZR86_RS06470 0.73 -1.5 1,436,106 + ABZR86_RS06470 0.82 +0.2 1,436,106 + ABZR86_RS06470 0.82 +0.5 1,436,106 + ABZR86_RS06470 0.82 -0.2 1,436,106 + ABZR86_RS06470 0.82 +0.8 1,436,106 + ABZR86_RS06470 0.82 -0.5 1,436,106 + ABZR86_RS06470 0.82 -0.7 1,436,107 - ABZR86_RS06470 0.82 +1.1 1,436,107 - ABZR86_RS06470 0.82 -0.3 1,436,107 - ABZR86_RS06470 0.82 +1.1 1,436,107 - ABZR86_RS06470 0.82 -1.4 1,436,166 + +0.5 1,436,166 + -0.6 1,436,167 - -1.3 1,436,167 - -0.1 1,436,327 + -0.7 1,436,345 + +0.7 1,436,345 + +0.4 1,436,345 + +0.9 1,436,346 - +1.2 1,436,379 + +0.1 1,436,380 - -0.2 1,436,380 - -0.9 1,436,394 - +1.0 1,436,394 - -0.2 1,436,394 - -0.1 1,436,399 + +0.8 1,436,399 + -0.2 1,436,400 - -0.2 1,436,410 + -1.5 1,436,553 + +0.2 1,436,554 - -0.1 1,436,554 - -0.0 1,436,641 + -0.6 1,436,641 + +0.0 1,436,641 + +0.3 1,436,641 + -0.3 1,436,641 + +0.0 1,436,641 + +0.1 1,436,642 - -0.7 1,436,642 - -0.7 1,436,642 - +1.0 1,436,659 + +1.4 1,436,659 + +2.5 1,436,660 - -0.7 1,436,726 + -2.2 1,436,727 - -0.7 1,436,814 + +1.3 1,436,814 + -0.3 1,436,822 + -0.6 1,436,826 + -0.2 1,436,826 + +0.5 1,436,826 + +0.3 1,436,826 + +0.2 1,436,827 - -1.1 1,436,836 + +1.1 1,436,880 + -0.2 1,436,880 + -0.2 1,436,880 + -1.4 1,436,880 + +0.2 1,436,881 - -2.6 1,436,883 + -2.2 1,436,884 - +0.1 1,436,894 + +0.8 1,436,894 + +0.4 1,436,895 - -1.0 1,436,898 + -1.3 1,436,923 + +0.7 1,436,923 + +1.5 1,436,924 - +0.8 1,436,924 - -1.4 1,436,924 - +3.0 1,436,936 - +1.3 1,436,936 - +0.6 1,436,944 + -2.2 1,437,011 + -0.8 1,437,011 + -2.6 1,437,011 + +0.9 1,437,012 - -2.5 1,437,124 + ABZR86_RS06480 0.12 +0.1 1,437,124 + ABZR86_RS06480 0.12 +0.4 1,437,124 + ABZR86_RS06480 0.12 -0.8 1,437,125 - ABZR86_RS06480 0.12 +0.2 1,437,125 - ABZR86_RS06480 0.12 -0.4 1,437,125 - ABZR86_RS06480 0.12 +1.3 1,437,125 - ABZR86_RS06480 0.12 +1.5 1,437,128 + ABZR86_RS06480 0.12 +0.4 1,437,234 + ABZR86_RS06480 0.19 -3.4 1,437,235 - ABZR86_RS06480 0.19 +0.5 1,437,283 + ABZR86_RS06480 0.21 -0.4 1,437,283 + ABZR86_RS06480 0.21 -1.1 1,437,284 - ABZR86_RS06480 0.21 -1.3 1,437,305 + ABZR86_RS06480 0.23 -0.5 1,437,305 + ABZR86_RS06480 0.23 -0.3 1,437,305 + ABZR86_RS06480 0.23 +0.6
Or see this region's nucleotide sequence