Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06155 and ABZR86_RS06160 are separated by 7 nucleotides ABZR86_RS06160 and ABZR86_RS06165 are separated by 217 nucleotides ABZR86_RS06165 and ABZR86_RS06170 are separated by 399 nucleotides
ABZR86_RS06155: ABZR86_RS06155 - aminodeoxychorismate synthase component I, at 1,380,256 to 1,381,605
_RS06155
ABZR86_RS06160: ABZR86_RS06160 - beta-ketoacyl-ACP synthase II, at 1,381,613 to 1,382,851
_RS06160
ABZR86_RS06165: ABZR86_RS06165 - acyl carrier protein, at 1,383,069 to 1,383,308
_RS06165
ABZR86_RS06170: ABZR86_RS06170 - 3-oxoacyl-ACP reductase FabG, at 1,383,708 to 1,384,451
_RS06170
Position (kb)
1381
1382
1383 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.932 kb on + strand, within ABZR86_RS06155 at 1381.003 kb on - strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155 at 1382.934 kb on - strand at 1382.934 kb on - strand at 1382.956 kb on + strand at 1382.956 kb on + strand at 1382.964 kb on - strand at 1383.350 kb on - strand at 1383.350 kb on - strand at 1383.581 kb on + strand at 1383.581 kb on + strand at 1383.709 kb on + strand at 1383.709 kb on + strand at 1383.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,380,623 + ABZR86_RS06155 0.27 +0.9 1,380,623 + ABZR86_RS06155 0.27 -1.9 1,380,623 + ABZR86_RS06155 0.27 +0.4 1,380,623 + ABZR86_RS06155 0.27 -1.4 1,380,623 + ABZR86_RS06155 0.27 +0.1 1,380,623 + ABZR86_RS06155 0.27 -1.0 1,380,623 + ABZR86_RS06155 0.27 +1.4 1,380,624 - ABZR86_RS06155 0.27 +0.4 1,380,624 - ABZR86_RS06155 0.27 -1.4 1,380,624 - ABZR86_RS06155 0.27 -1.6 1,380,624 - ABZR86_RS06155 0.27 -2.5 1,380,624 - ABZR86_RS06155 0.27 +1.9 1,380,624 - ABZR86_RS06155 0.27 +0.5 1,380,624 - ABZR86_RS06155 0.27 +0.1 1,380,624 - ABZR86_RS06155 0.27 -0.2 1,380,624 - ABZR86_RS06155 0.27 +0.4 1,380,932 + ABZR86_RS06155 0.50 +1.0 1,381,003 - ABZR86_RS06155 0.55 -2.8 1,381,292 + ABZR86_RS06155 0.77 -1.4 1,381,292 + ABZR86_RS06155 0.77 -1.2 1,381,292 + ABZR86_RS06155 0.77 -0.5 1,381,292 + ABZR86_RS06155 0.77 +0.6 1,381,293 - ABZR86_RS06155 0.77 +0.5 1,381,293 - ABZR86_RS06155 0.77 -0.4 1,382,934 - +1.0 1,382,934 - -1.6 1,382,956 + -3.1 1,382,956 + -1.6 1,382,964 - -0.3 1,383,350 - -4.4 1,383,350 - -1.1 1,383,581 + -3.5 1,383,581 + +1.4 1,383,709 + +1.3 1,383,709 + +0.7 1,383,719 - -0.3
Or see this region's nucleotide sequence