Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03000 and ABZR86_RS03005 are separated by 22 nucleotides ABZR86_RS03005 and ABZR86_RS03010 overlap by 4 nucleotides
ABZR86_RS03000: ABZR86_RS03000 - SDR family oxidoreductase, at 613,947 to 614,951
_RS03000
ABZR86_RS03005: ABZR86_RS03005 - YetF domain-containing protein, at 614,974 to 615,441
_RS03005
ABZR86_RS03010: ABZR86_RS03010 - cation diffusion facilitator family transporter, at 615,438 to 616,406
_RS03010
Position (kb) 614
615
616 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 614.194 kb on - strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.665 kb on - strand, within ABZR86_RS03000 at 614.871 kb on + strand at 614.871 kb on + strand at 614.875 kb on + strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.904 kb on + strand at 614.904 kb on + strand at 614.905 kb on - strand at 614.963 kb on + strand at 614.964 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.034 kb on + strand, within ABZR86_RS03005 at 615.720 kb on + strand, within ABZR86_RS03010 at 615.780 kb on + strand, within ABZR86_RS03010 at 615.781 kb on - strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.060 kb on - strand, within ABZR86_RS03010 at 616.268 kb on + strand, within ABZR86_RS03010
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 614,194 - ABZR86_RS03000 0.25 +1.0 614,525 + ABZR86_RS03000 0.58 -0.4 614,525 + ABZR86_RS03000 0.58 -2.7 614,526 - ABZR86_RS03000 0.58 +0.4 614,526 - ABZR86_RS03000 0.58 -3.2 614,526 - ABZR86_RS03000 0.58 +1.6 614,665 - ABZR86_RS03000 0.71 -0.0 614,871 + +1.2 614,871 + -1.1 614,875 + +0.8 614,876 - -0.1 614,876 - +0.2 614,876 - +1.2 614,876 - +1.0 614,876 - -0.8 614,904 + +0.5 614,904 + -0.2 614,905 - +0.2 614,963 + +0.8 614,964 - -0.8 615,005 - -0.9 615,005 - -1.3 615,005 - +1.8 615,034 + ABZR86_RS03005 0.13 +1.5 615,720 + ABZR86_RS03010 0.29 -0.1 615,780 + ABZR86_RS03010 0.35 -3.1 615,781 - ABZR86_RS03010 0.35 -1.5 616,059 + ABZR86_RS03010 0.64 +0.3 616,059 + ABZR86_RS03010 0.64 +0.1 616,059 + ABZR86_RS03010 0.64 +0.4 616,059 + ABZR86_RS03010 0.64 +1.2 616,060 - ABZR86_RS03010 0.64 +0.0 616,268 + ABZR86_RS03010 0.86 -0.8
Or see this region's nucleotide sequence