Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3113 and DvMF_3114 are separated by 157 nucleotides DvMF_3114 and DvMF_3115 are separated by 158 nucleotides
DvMF_3113: DvMF_3113 - protein of unknown function DUF115 (RefSeq), at 3,925,819 to 3,927,588
_3113
DvMF_3114: DvMF_3114 - hypothetical protein (RefSeq), at 3,927,746 to 3,930,994
_3114
DvMF_3115: DvMF_3115 - nitroreductase (RefSeq), at 3,931,153 to 3,931,977
_3115
Position (kb)
3927
3928
3929
3930
3931 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 3926.937 kb on - strand, within DvMF_3113 at 3927.244 kb on + strand, within DvMF_3113 at 3927.356 kb on + strand, within DvMF_3113 at 3927.527 kb on + strand at 3927.535 kb on - strand at 3927.657 kb on + strand at 3927.827 kb on - strand at 3928.284 kb on + strand, within DvMF_3114 at 3928.300 kb on + strand, within DvMF_3114 at 3928.302 kb on - strand, within DvMF_3114 at 3928.429 kb on - strand, within DvMF_3114 at 3928.650 kb on + strand, within DvMF_3114 at 3928.869 kb on + strand, within DvMF_3114 at 3928.950 kb on + strand, within DvMF_3114 at 3929.022 kb on + strand, within DvMF_3114 at 3929.069 kb on - strand, within DvMF_3114 at 3929.224 kb on + strand, within DvMF_3114 at 3929.281 kb on - strand, within DvMF_3114 at 3929.349 kb on - strand, within DvMF_3114 at 3929.394 kb on + strand, within DvMF_3114 at 3929.703 kb on + strand, within DvMF_3114 at 3929.711 kb on - strand, within DvMF_3114 at 3929.748 kb on - strand, within DvMF_3114 at 3929.748 kb on - strand, within DvMF_3114 at 3929.873 kb on - strand, within DvMF_3114 at 3929.888 kb on + strand, within DvMF_3114 at 3929.893 kb on + strand, within DvMF_3114 at 3929.967 kb on + strand, within DvMF_3114 at 3930.796 kb on - strand at 3930.845 kb on + strand at 3930.845 kb on + strand at 3930.845 kb on + strand at 3931.341 kb on + strand, within DvMF_3115 at 3931.490 kb on - strand, within DvMF_3115 at 3931.617 kb on + strand, within DvMF_3115
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1 mg/ml remove 3,926,937 - DvMF_3113 0.63 -0.4 3,927,244 + DvMF_3113 0.81 +0.0 3,927,356 + DvMF_3113 0.87 +0.6 3,927,527 + -0.2 3,927,535 - -0.4 3,927,657 + -0.2 3,927,827 - -0.8 3,928,284 + DvMF_3114 0.17 -0.1 3,928,300 + DvMF_3114 0.17 -0.4 3,928,302 - DvMF_3114 0.17 -0.2 3,928,429 - DvMF_3114 0.21 -0.5 3,928,650 + DvMF_3114 0.28 -0.4 3,928,869 + DvMF_3114 0.35 -5.9 3,928,950 + DvMF_3114 0.37 -4.0 3,929,022 + DvMF_3114 0.39 -5.9 3,929,069 - DvMF_3114 0.41 -3.9 3,929,224 + DvMF_3114 0.45 -4.2 3,929,281 - DvMF_3114 0.47 -4.1 3,929,349 - DvMF_3114 0.49 -4.6 3,929,394 + DvMF_3114 0.51 -3.6 3,929,703 + DvMF_3114 0.60 -4.0 3,929,711 - DvMF_3114 0.60 -3.7 3,929,748 - DvMF_3114 0.62 -5.1 3,929,748 - DvMF_3114 0.62 -3.2 3,929,873 - DvMF_3114 0.65 -7.3 3,929,888 + DvMF_3114 0.66 -4.8 3,929,893 + DvMF_3114 0.66 -1.8 3,929,967 + DvMF_3114 0.68 -4.1 3,930,796 - -5.9 3,930,845 + -2.8 3,930,845 + -2.5 3,930,845 + -6.0 3,931,341 + DvMF_3115 0.23 -0.3 3,931,490 - DvMF_3115 0.41 -0.7 3,931,617 + DvMF_3115 0.56 -0.8
Or see this region's nucleotide sequence