Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2322
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,920,661 | - | DvMF_2321 | 0.12 | +0.0 | |
2,920,833 | - | DvMF_2321 | 0.36 | -0.8 | |
2,921,028 | + | DvMF_2321 | 0.64 | -0.5 | |
2,921,094 | - | DvMF_2321 | 0.73 | +0.3 | |
2,921,123 | + | DvMF_2321 | 0.77 | -0.6 | |
2,921,290 | - | -0.6 | |||
2,921,343 | + | -1.0 | |||
2,921,543 | + | -0.5 | |||
2,921,838 | + | +0.2 | |||
2,921,914 | - | DvMF_2322 | 0.11 | -0.3 | |
2,921,988 | + | DvMF_2322 | 0.13 | -0.1 | |
2,922,127 | + | DvMF_2322 | 0.19 | -0.7 | |
2,922,259 | + | DvMF_2322 | 0.23 | -1.4 | |
2,922,417 | - | DvMF_2322 | 0.29 | -0.2 | |
2,922,715 | - | DvMF_2322 | 0.40 | -0.4 | |
2,923,030 | + | DvMF_2322 | 0.52 | -0.3 | |
2,923,146 | + | DvMF_2322 | 0.56 | -0.6 | |
2,923,241 | + | DvMF_2322 | 0.60 | -0.6 | |
2,923,492 | - | DvMF_2322 | 0.69 | -0.6 | |
2,923,676 | + | DvMF_2322 | 0.76 | -0.5 | |
2,923,695 | - | DvMF_2322 | 0.76 | -0.8 | |
2,923,741 | - | DvMF_2322 | 0.78 | -1.0 | |
2,923,751 | - | DvMF_2322 | 0.78 | -0.4 | |
2,924,012 | + | DvMF_2322 | 0.88 | -1.1 | |
2,925,127 | - | DvMF_2323 | 0.27 | -0.9 | |
2,925,255 | + | DvMF_2323 | 0.39 | -2.5 |
Or see this region's nucleotide sequence