Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2254 and DvMF_2255 are separated by 71 nucleotides DvMF_2255 and DvMF_2256 are separated by 426 nucleotides DvMF_2256 and DvMF_2257 are separated by 325 nucleotides
DvMF_2254: DvMF_2254 - cobyrinic acid a,c-diamide synthase (RefSeq), at 2,832,792 to 2,834,408
_2254
DvMF_2255: DvMF_2255 - hypothetical protein (RefSeq), at 2,834,480 to 2,834,737
_2255
DvMF_2256: DvMF_2256 - transcriptional regulator, MucR family (RefSeq), at 2,835,164 to 2,835,556
_2256
DvMF_2257: DvMF_2257 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,835,882 to 2,837,693
_2257
Position (kb)
2835
2836 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2834.437 kb on + strand at 2834.858 kb on + strand at 2835.181 kb on + strand at 2835.269 kb on - strand, within DvMF_2256 at 2835.484 kb on - strand, within DvMF_2256 at 2835.577 kb on - strand at 2836.118 kb on + strand, within DvMF_2257 at 2836.198 kb on + strand, within DvMF_2257 at 2836.231 kb on + strand, within DvMF_2257 at 2836.547 kb on - strand, within DvMF_2257 at 2836.552 kb on - strand, within DvMF_2257
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1 mg/ml remove 2,834,437 + +0.1 2,834,858 + -0.6 2,835,181 + -1.4 2,835,269 - DvMF_2256 0.27 -3.2 2,835,484 - DvMF_2256 0.81 -1.0 2,835,577 - -0.6 2,836,118 + DvMF_2257 0.13 -0.2 2,836,198 + DvMF_2257 0.17 -0.5 2,836,231 + DvMF_2257 0.19 -0.2 2,836,547 - DvMF_2257 0.37 -0.4 2,836,552 - DvMF_2257 0.37 +0.1
Or see this region's nucleotide sequence