Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2185
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,727,031 | - | DvMF_2184 | 0.52 | +1.3 | |
2,727,120 | - | DvMF_2184 | 0.59 | -0.4 | |
2,727,235 | + | DvMF_2184 | 0.68 | -0.5 | |
2,727,243 | - | DvMF_2184 | 0.68 | -0.5 | |
2,727,287 | + | DvMF_2184 | 0.72 | -0.3 | |
2,727,351 | + | DvMF_2184 | 0.76 | -0.6 | |
2,727,351 | + | DvMF_2184 | 0.76 | -0.5 | |
2,727,655 | + | +1.2 | |||
2,727,679 | + | +0.3 | |||
2,727,737 | - | -0.2 | |||
2,728,013 | - | +0.2 | |||
2,728,118 | + | DvMF_2185 | 0.22 | -0.8 | |
2,728,148 | - | DvMF_2185 | 0.26 | -0.7 | |
2,728,153 | - | DvMF_2185 | 0.26 | -0.6 | |
2,728,705 | - | -0.2 | |||
2,728,876 | + | -0.2 | |||
2,728,889 | + | -0.3 | |||
2,728,920 | - | +1.3 | |||
2,729,109 | - | DvMF_2186 | 0.11 | +1.5 | |
2,729,163 | - | DvMF_2186 | 0.15 | -0.4 | |
2,729,169 | + | DvMF_2186 | 0.15 | -0.4 | |
2,729,266 | - | DvMF_2186 | 0.21 | -0.5 | |
2,729,350 | + | DvMF_2186 | 0.27 | -0.8 | |
2,729,570 | - | DvMF_2186 | 0.42 | -0.5 | |
2,729,606 | - | DvMF_2186 | 0.44 | -0.4 |
Or see this region's nucleotide sequence