Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2080
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,584,964 | - | DvMF_2079 | 0.79 | -0.6 | |
2,585,138 | + | DvMF_2079 | 0.88 | -0.2 | |
2,585,187 | - | -0.2 | |||
2,585,253 | + | -0.1 | |||
2,585,317 | - | -1.1 | |||
2,585,353 | - | -0.4 | |||
2,585,375 | - | -0.4 | |||
2,585,414 | - | -0.3 | |||
2,585,449 | + | -0.5 | |||
2,585,555 | - | -0.2 | |||
2,586,301 | - | DvMF_2080 | 0.30 | -6.2 | |
2,586,301 | - | DvMF_2080 | 0.30 | -3.3 | |
2,586,311 | - | DvMF_2080 | 0.30 | -6.0 | |
2,586,323 | - | DvMF_2080 | 0.31 | -3.1 | |
2,586,514 | - | DvMF_2080 | 0.46 | -3.0 | |
2,586,641 | - | DvMF_2080 | 0.55 | -4.6 | |
2,586,706 | - | DvMF_2080 | 0.60 | -3.6 | |
2,586,923 | - | DvMF_2080 | 0.77 | -3.2 | |
2,586,940 | - | DvMF_2080 | 0.78 | -5.2 | |
2,586,999 | + | DvMF_2080 | 0.82 | -3.4 | |
2,587,003 | - | DvMF_2080 | 0.83 | -5.8 | |
2,587,097 | + | DvMF_2080 | 0.90 | -2.6 | |
2,587,362 | + | -1.1 | |||
2,587,375 | - | -1.0 | |||
2,587,375 | - | -1.0 | |||
2,587,432 | + | -0.6 | |||
2,587,442 | + | -0.8 | |||
2,587,450 | - | -0.0 | |||
2,587,466 | - | -0.9 | |||
2,587,471 | - | -0.4 | |||
2,587,521 | + | -2.0 | |||
2,587,874 | + | -0.5 | |||
2,587,989 | - | -1.0 | |||
2,588,033 | - | -0.3 | |||
2,588,068 | + | -0.6 | |||
2,588,137 | - | -1.3 | |||
2,588,163 | - | -0.9 | |||
2,588,174 | + | -0.5 |
Or see this region's nucleotide sequence