Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1573
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,938,250 | - | -0.2 | |||
1,938,263 | - | +0.0 | |||
1,938,530 | - | DvMF_1572 | 0.32 | +1.7 | |
1,938,646 | - | DvMF_1572 | 0.52 | +0.3 | |
1,938,917 | + | -0.0 | |||
1,939,047 | + | +1.1 | |||
1,939,143 | - | +3.2 | |||
1,939,278 | - | DvMF_1573 | 0.13 | +3.1 | |
1,939,709 | + | DvMF_1573 | 0.44 | +3.3 | |
1,939,717 | - | DvMF_1573 | 0.44 | +3.1 | |
1,939,774 | + | DvMF_1573 | 0.48 | +2.8 | |
1,939,922 | - | DvMF_1573 | 0.59 | +3.4 | |
1,939,971 | - | DvMF_1573 | 0.62 | +1.7 | |
1,940,013 | + | DvMF_1573 | 0.65 | +2.9 | |
1,940,021 | - | DvMF_1573 | 0.66 | +2.6 | |
1,940,096 | - | DvMF_1573 | 0.71 | +2.8 | |
1,940,466 | - | +2.8 | |||
1,940,466 | - | +3.4 | |||
1,940,525 | + | +2.3 | |||
1,940,525 | + | +2.5 | |||
1,940,528 | - | +2.3 | |||
1,940,618 | + | +2.7 | |||
1,940,637 | + | +5.2 | |||
1,940,716 | - | DvMF_1574 | 0.14 | +2.7 | |
1,941,107 | + | DvMF_1574 | 0.49 | +3.0 | |
1,941,199 | + | DvMF_1574 | 0.57 | +3.1 | |
1,941,338 | - | DvMF_1574 | 0.69 | +3.4 |
Or see this region's nucleotide sequence