Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1541
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,901,533 | - | DvMF_1540 | 0.34 | -0.9 | |
1,901,549 | + | DvMF_1540 | 0.35 | -0.7 | |
1,901,557 | - | DvMF_1540 | 0.36 | -1.8 | |
1,901,557 | - | DvMF_1540 | 0.36 | -0.8 | |
1,901,619 | + | DvMF_1540 | 0.40 | -0.8 | |
1,901,629 | + | DvMF_1540 | 0.41 | -0.7 | |
1,901,778 | + | DvMF_1540 | 0.52 | -0.8 | |
1,901,807 | + | DvMF_1540 | 0.54 | -0.9 | |
1,901,815 | - | DvMF_1540 | 0.55 | -1.2 | |
1,901,952 | + | DvMF_1540 | 0.65 | -1.1 | |
1,902,078 | + | DvMF_1540 | 0.74 | -0.4 | |
1,902,118 | - | DvMF_1540 | 0.77 | +0.2 | |
1,902,190 | + | DvMF_1540 | 0.82 | -0.8 | |
1,902,262 | + | DvMF_1540 | 0.87 | -1.2 | |
1,902,275 | - | DvMF_1540 | 0.88 | -1.7 | |
1,902,526 | + | -1.5 | |||
1,902,546 | - | DvMF_1541 | 0.11 | -1.0 | |
1,902,619 | - | DvMF_1541 | 0.22 | +0.3 | |
1,903,165 | - | -0.1 | |||
1,903,186 | - | -0.7 | |||
1,903,316 | - | -0.3 | |||
1,903,755 | + | DvMF_1542 | 0.45 | +0.2 | |
1,903,781 | - | DvMF_1542 | 0.48 | -0.3 | |
1,903,797 | - | DvMF_1542 | 0.50 | -0.9 | |
1,903,808 | - | DvMF_1542 | 0.51 | -0.6 | |
1,903,888 | + | DvMF_1542 | 0.60 | -0.4 | |
1,903,896 | - | DvMF_1542 | 0.61 | +0.5 |
Or see this region's nucleotide sequence