Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1112
Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,360,499 | - | DvMF_1110 | 0.30 | -0.4 | |
1,360,575 | + | DvMF_1110 | 0.54 | -1.1 | |
1,360,865 | + | -0.2 | |||
1,360,973 | - | DvMF_1111 | 0.25 | -0.8 | |
1,361,175 | + | -0.7 | |||
1,361,591 | - | DvMF_1112 | 0.12 | +0.1 | |
1,361,591 | - | DvMF_1112 | 0.12 | +1.6 | |
1,361,899 | + | DvMF_1112 | 0.46 | -0.8 | |
1,361,899 | + | DvMF_1112 | 0.46 | -0.3 | |
1,361,907 | - | DvMF_1112 | 0.47 | -0.1 | |
1,361,913 | - | DvMF_1112 | 0.48 | -0.1 | |
1,362,088 | - | DvMF_1112 | 0.67 | -0.5 | |
1,362,148 | - | DvMF_1112 | 0.74 | -0.4 | |
1,362,537 | + | +0.0 | |||
1,362,645 | + | DvMF_1113 | 0.23 | +0.2 | |
1,362,981 | - | DvMF_1113 | 0.64 | -0.1 | |
1,362,981 | - | DvMF_1113 | 0.64 | -0.6 | |
1,363,029 | - | DvMF_1113 | 0.70 | +0.5 | |
1,363,093 | - | DvMF_1113 | 0.78 | -0.7 | |
1,363,112 | + | DvMF_1113 | 0.80 | +0.1 | |
1,363,290 | + | -0.0 | |||
1,363,298 | - | -0.6 | |||
1,363,343 | - | -0.5 | |||
1,363,370 | + | -0.3 |
Or see this region's nucleotide sequence