Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0701 and DvMF_0702 are separated by 245 nucleotides DvMF_0702 and DvMF_0703 are separated by 32 nucleotides DvMF_0703 and DvMF_0704 are separated by 2 nucleotides
DvMF_0701: DvMF_0701 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 849,817 to 851,454
_0701
DvMF_0702: DvMF_0702 - hypothetical protein (RefSeq), at 851,700 to 852,092
_0702
DvMF_0703: DvMF_0703 - protein of unknown function DUF81 (RefSeq), at 852,125 to 853,063
_0703
DvMF_0704: DvMF_0704 - hypothetical protein (RefSeq), at 853,066 to 853,830
_0704
Position (kb) 851
852
853 Strain fitness (log2 ratio) -2
-1
0
1
2 at 850.720 kb on + strand, within DvMF_0701 at 850.875 kb on + strand, within DvMF_0701 at 850.917 kb on + strand, within DvMF_0701 at 851.120 kb on - strand, within DvMF_0701 at 851.694 kb on - strand at 851.962 kb on + strand, within DvMF_0702 at 852.006 kb on + strand, within DvMF_0702 at 852.142 kb on - strand at 852.193 kb on - strand at 852.214 kb on + strand at 852.341 kb on - strand, within DvMF_0703 at 852.686 kb on - strand, within DvMF_0703 at 852.757 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.813 kb on - strand, within DvMF_0703 at 852.839 kb on + strand, within DvMF_0703
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1 mg/ml remove 850,720 + DvMF_0701 0.55 -0.3 850,875 + DvMF_0701 0.65 -1.1 850,917 + DvMF_0701 0.67 +0.1 851,120 - DvMF_0701 0.80 -0.5 851,694 - -0.7 851,962 + DvMF_0702 0.67 +0.0 852,006 + DvMF_0702 0.78 +2.2 852,142 - -2.0 852,193 - -0.4 852,214 + -0.8 852,341 - DvMF_0703 0.23 -0.1 852,686 - DvMF_0703 0.60 -0.2 852,757 + DvMF_0703 0.67 -0.9 852,795 + DvMF_0703 0.71 -0.7 852,795 + DvMF_0703 0.71 -1.6 852,813 - DvMF_0703 0.73 -0.5 852,839 + DvMF_0703 0.76 -0.3
Or see this region's nucleotide sequence