Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0668

Experiment: MoYLS4 with Bacitracin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0667 and DvMF_0668 are separated by 55 nucleotidesDvMF_0668 and DvMF_0669 are separated by 2 nucleotides DvMF_0667: DvMF_0667 - hypothetical protein (RefSeq), at 805,097 to 806,107 _0667 DvMF_0668: DvMF_0668 - ATP-grasp protein-like protein (RefSeq), at 806,163 to 807,344 _0668 DvMF_0669: DvMF_0669 - hypothetical protein (RefSeq), at 807,347 to 809,689 _0669 Position (kb) 806 807 808Strain fitness (log2 ratio) -2 -1 0 1at 805.206 kb on - strand, within DvMF_0667at 805.346 kb on + strand, within DvMF_0667at 805.757 kb on + strand, within DvMF_0667at 805.763 kb on - strand, within DvMF_0667at 805.794 kb on + strand, within DvMF_0667at 805.814 kb on + strand, within DvMF_0667at 805.822 kb on - strand, within DvMF_0667at 805.822 kb on - strand, within DvMF_0667at 805.869 kb on + strand, within DvMF_0667at 806.186 kb on - strandat 806.592 kb on + strand, within DvMF_0668at 807.015 kb on + strand, within DvMF_0668at 807.121 kb on + strand, within DvMF_0668at 807.235 kb on + strandat 807.500 kb on + strandat 807.546 kb on - strandat 807.823 kb on + strand, within DvMF_0669at 807.842 kb on + strand, within DvMF_0669at 807.912 kb on + strand, within DvMF_0669at 808.048 kb on - strand, within DvMF_0669at 808.201 kb on - strand, within DvMF_0669at 808.280 kb on + strand, within DvMF_0669at 808.280 kb on + strand, within DvMF_0669

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1 mg/ml
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805,206 - DvMF_0667 0.11 -0.4
805,346 + DvMF_0667 0.25 -0.8
805,757 + DvMF_0667 0.65 +0.2
805,763 - DvMF_0667 0.66 -0.0
805,794 + DvMF_0667 0.69 -0.9
805,814 + DvMF_0667 0.71 -1.6
805,822 - DvMF_0667 0.72 +0.4
805,822 - DvMF_0667 0.72 -0.3
805,869 + DvMF_0667 0.76 -0.7
806,186 - -0.5
806,592 + DvMF_0668 0.36 +0.3
807,015 + DvMF_0668 0.72 +0.4
807,121 + DvMF_0668 0.81 -0.5
807,235 + -0.4
807,500 + -0.3
807,546 - -0.8
807,823 + DvMF_0669 0.20 +0.2
807,842 + DvMF_0669 0.21 -0.9
807,912 + DvMF_0669 0.24 -0.6
808,048 - DvMF_0669 0.30 -0.4
808,201 - DvMF_0669 0.36 -1.8
808,280 + DvMF_0669 0.40 -0.8
808,280 + DvMF_0669 0.40 -0.6

Or see this region's nucleotide sequence